C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Yip1 domain family, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034700 Yipf2-201 ENSMUSG00000032182 10090 - 9:21588709-21592831 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderKidneyLiverPlacentaENSMUST00000034700
Transcript ID Bladder Kidney Liver Placenta
ENSMUST00000034700 10.801±0.00 13.674±0.55 7.139±0.26 13.748±3.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002S5 CIL_0002S5_0002 CGP 9:21526176-21589487
CIL_0004ZT CIL_0004ZT_0003 CGP 9:21546894-21592831
CIL_0004ZU CIL_0004ZU_0003 CGP 9:21588709-21595970

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0030133 IEA transport vesicle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253031 YIPF2-001 protein_coding Homo_sapiens 0 747
ENST00000327064 CARM1-002 protein_coding Homo_sapiens 2e-29 135
ENST00000585858 YIPF2-003 protein_coding Homo_sapiens 0 416
ENST00000586575 YIPF2-012 protein_coding Homo_sapiens 0 713
ENST00000586748 YIPF2-002 protein_coding Homo_sapiens 0 747
ENST00000587943 YIPF2-004 protein_coding Homo_sapiens 0 597
ENST00000588347 YIPF2-006 protein_coding Homo_sapiens 0 595
ENST00000588962 YIPF2-011 retained_intron Homo_sapiens 0 399
ENST00000589971 YIPF2-009 protein_coding Homo_sapiens 1e-35 154
ENST00000590329 YIPF2-007 protein_coding Homo_sapiens 0 263
ENST00000592646 YIPF2-010 protein_coding Homo_sapiens 0 414

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