C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cellular retinoic acid binding protein I
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034830 Crabp1-001 ENSMUSG00000032291 10090 + 9:54764748-54773110 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034830
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034830 11.045±0.81 14.683±3.09 0.050±0.01 31.180±20.75 8.723±3.06 4.019±2.66 0.063±0.02 0.321±0.26 0.615±0.45 2.808±0.73 0.167±0.11 3.786±1.43 1.830±1.17 6.260±1.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00050O CIL_00050O_0003 CGP 9:54714735-54773110
CIL_00020I CIL_00020I_0002 CGP 9:54764748-54912534

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001972 IEA retinoic acid binding
GO:0005215 IEA transporter activity
GO:0005501 TAS retinoid binding
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005829 IEA cytosol
GO:0006810 IEA transport
GO:0016918 IEA retinal binding
GO:0019841 IEA retinol binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299529 CRABP1-001 protein_coding Homo_sapiens 0 623
ENST00000406419 CRABP1-002 nonsense_mediated_decay Homo_sapiens 0 296

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