C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cellular retinoic acid binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000299529 CRABP1-001 ENSG00000166426 9606 + 15:78340324-78348230 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyMuscleOvaryPlacentaTestisENST00000299529
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Muscle Ovary Placenta Testis
ENST00000299529 0.126±0.00 1.354±0.00 6.335±2.57 4.183±3.60 5.535±0.00 0.120±0.00 4.926±0.00 0.136±0.00 5.857±7.21 11.531±5.04 0.912±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00050O CIL_00050O_0002 CGP 15:78277835-78348230
CIL_00020I CIL_00020I_0001 CGP 15:78340324-78501456

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001972 IEA retinoic acid binding
GO:0005215 IEA transporter activity
GO:0005501 TAS retinoid binding
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005829 IEA cytosol
GO:0006810 IEA transport
GO:0007165 TAS signal transduction
GO:0007275 TAS multicellular organismal development
GO:0016918 IEA retinal binding
GO:0019841 IEA retinol binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034830 Crabp1-001 protein_coding Mus_musculus 0 623

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