C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00020I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000166426-ENSG00000136381 CGP 9606 15:78340324-78501456
GeneTranscriptPositionBiotype
ENSG00000136381 (IREB2)
iron-responsive element binding protein 2 		ENST00000258886 (IREB2-001) 78438189-78501456 protein_coding
ENST00000558525 (IREB2-008) 78438228-78471801 nonsense_mediated_decay
ENST00000558570 (IREB2-003) 78438309-78498209 nonsense_mediated_decay
ENST00000559091 (IREB2-009) 78494210-78497338 protein_coding
ENST00000559215 (IREB2-006) 78438176-78466436 nonsense_mediated_decay
ENST00000559427 (IREB2-007) 78465299-78470948 processed_transcript
ENST00000559676 (IREB2-010) 78483420-78488756 retained_intron
ENST00000560440 (IREB2-002) 78438284-78476700 protein_coding
ENST00000560454 (IREB2-005) 78438422-78462944 processed_transcript
ENST00000560840 (IREB2-004) 78437431-78465264 protein_coding
ENSG00000166426 (CRABP1)
cellular retinoic acid binding protein 1 		ENST00000299529 (CRABP1-001) 78340324-78348230 protein_coding
ENST00000406419 (CRABP1-002) 78340476-78348078 nonsense_mediated_decay
ENST00000560753 (CRABP1-003) 78347821-78348221 retained_intron
ENSG00000259413 (RP11-5O23.1)
 ENST00000558606 (RP11-5O23.1-001) 78382573-78383155 processed_pseudogene
ENSG00000259474 (RP11-650L12.1)
 ENST00000560094 (RP11-650L12.1-001) 78480057-78481820 antisense
ENSG00000279694 (RP11-5O23.2)
 ENST00000624293 (RP11-5O23.2-001) 78339208-78341757 TEC
CIL_00020I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032291-ENSMUSG00000032293 CGP 10090 9:54764748-54912534
GeneTranscriptPositionBiotype
ENSMUSG00000032291 (Crabp1)
cellular retinoic acid binding protein I 		ENSMUST00000034830 (Crabp1-001) 54764748-54773110 protein_coding
ENSMUSG00000032293 (Ireb2)
iron responsive element binding protein 2 		ENSMUST00000034843 (Ireb2-201) 54863755-54912534 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00020I_0001ENSG00000136381ENST00000258886ENST00000558525ENST00000558570ENST00000559091ENST00000559215ENST00000559427ENST00000559676ENST00000560440ENST00000560454ENST00000560840ENSG00000166426ENST00000299529ENST00000406419ENST00000560753ENSG00000259413ENST00000558606ENSG00000259474ENST00000560094ENSG00000279694ENST00000624293CIL_00020I_0002ENSMUSG00000032291ENSMUST00000034830ENSMUSG00000032293ENSMUST00000034843
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00020I_0001ENSG00000136381ENST00000258886ENST00000558570ENSG00000166426ENST00000299529ENST00000406419ENST00000560753ENSG00000259413ENST00000558606ENSG00000259474ENST00000560094ENSG00000279694ENST00000624293CIL_00020I_0002ENSMUSG00000032291ENSMUST00000034830ENSMUSG00000032293ENSMUST00000034843
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136381 ENST00000258886 3.876±0.00 3.490±0.00 2.398±0.00 4.671±0.96 5.699±0.00 4.621±1.81 3.089±1.03 4.557±0.80 3.362±1.45 4.522±1.54 3.285±0.00 4.065±1.22 4.514±1.11 7.457±0.14
ENST00000558525 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.510±0.00 N/A N/A
ENST00000559091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000560840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000166426 ENST00000299529 N/A 0.126±0.00 1.354±0.00 6.335±2.57 4.183±3.60 5.535±0.00 0.120±0.00 4.926±0.00 N/A N/A 0.136±0.00 5.857±7.21 11.531±5.04 0.912±0.45
ENST00000406419 0.080±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00 0.219±0.00 0.336±0.00 N/A N/A
ENST00000560753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.065±0.00 N/A N/A
ENSG00000259413 ENST00000558606 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.021±0.00 N/A N/A
ENSG00000259474 ENST00000560094 0.041±0.00 0.538±0.00 N/A 0.084±0.00 0.282±0.00 0.113±0.00 0.074±0.00 N/A 0.208±0.00 N/A N/A 0.204±0.00 N/A 0.102±0.00
ENSG00000279694 ENST00000624293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.032±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032291 ENSMUST00000034830 11.045±0.81 14.683±3.09 0.050±0.01 31.180±20.75 8.723±3.06 4.019±2.66 0.063±0.02 0.321±0.26 0.615±0.45 2.808±0.73 0.167±0.11 3.786±1.43 1.830±1.17 6.260±1.45
ENSMUSG00000032293 ENSMUST00000034843 5.507±2.82 2.709±0.68 6.224±0.88 16.052±8.08 4.162±1.37 2.987±1.13 3.347±0.24 6.796±1.01 8.153±1.49 6.079±0.69 4.287±0.51 6.450±3.73 14.841±2.47 10.972±3.35

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