C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: electron transferring flavoprotein, alpha polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000034866 Etfa-001 ENSMUSG00000032314 10090 - 9:55454508-55512243 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034866
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034866 79.893±27.42 109.968±74.91 41.380±1.47 12.728±2.59 87.707±11.37 49.997±15.17 189.726±6.67 126.987±13.33 145.789±40.20 36.134±2.95 59.364±15.30 50.502±14.95 39.228±18.70 8.572±3.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000247 CIL_000247_0002 CGP 9:55326913-55512243
CIL_000248 CIL_000248_0002 CGP 9:55454508-55546180

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0009055 TAS electron carrier activity
GO:0016491 IEA oxidoreductase activity
GO:0017133 TAS mitochondrial electron transfer flavoprotein complex
GO:0055114 IEA oxidation-reduction process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267950 ETFA-015 nonsense_mediated_decay Homo_sapiens 0 1048
ENST00000433983 ETFA-002 protein_coding Homo_sapiens 0 1147
ENST00000557943 ETFA-001 protein_coding Homo_sapiens 0 1411
ENST00000557975 ETFA-018 retained_intron Homo_sapiens 0 191
ENST00000558803 ETFA-009 retained_intron Homo_sapiens 0 224
ENST00000559075 ETFA-003 retained_intron Homo_sapiens 0 1225
ENST00000559386 ETFA-011 protein_coding Homo_sapiens 0 900
ENST00000559602 ETFA-014 protein_coding Homo_sapiens 0 926
ENST00000559758 ETFA-008 retained_intron Homo_sapiens 0 760
ENST00000559973 ETFA-017 protein_coding Homo_sapiens 0 944
ENST00000560044 ETFA-004 nonsense_mediated_decay Homo_sapiens 0 1098
ENST00000560179 ETFA-016 retained_intron Homo_sapiens 0 191
ENST00000560309 ETFA-005 nonsense_mediated_decay Homo_sapiens 0 339
ENST00000560345 ETFA-012 protein_coding Homo_sapiens 0 630
ENST00000560595 ETFA-019 protein_coding Homo_sapiens 0 900
ENST00000560726 ETFA-006 protein_coding Homo_sapiens 0 1046
ENST00000560816 ETFA-010 processed_transcript Homo_sapiens 0 508
ENST00000560899 ETFA-007 nonsense_mediated_decay Homo_sapiens 0 859
ENST00000561092 ETFA-013 retained_intron Homo_sapiens 0 267
ENST00000565910 ETFA-020 nonsense_mediated_decay Homo_sapiens 0 191

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