C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: golgi reassembly stacking protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035099 Gorasp1-201 ENSMUSG00000032513 10090 - 9:119925673-119937558 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035099
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035099 13.297±0.21 18.759±1.17 16.623±2.65 9.886±1.87 10.492±1.58 21.870±0.91 8.524±0.55 10.750±1.12 9.673±2.05 9.894±0.72 5.974±0.59 14.820±3.96 8.611±2.22 10.620±1.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006H1 CIL_0006H1_0002 CGP 9:119753763-119926579
CIL_0006HJ CIL_0006HJ_0002 CGP 9:119925673-119967793

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005737 ISO cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0007030 ISS Golgi organization
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0050774 ISS negative regulation of dendrite morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302313 WDR48-001 protein_coding Homo_sapiens 1e-36 159
ENST00000319283 GORASP1-001 protein_coding Homo_sapiens 0 1158
ENST00000411813 GORASP1-011 protein_coding Homo_sapiens 0 411
ENST00000413243 GORASP1-012 nonsense_mediated_decay Homo_sapiens 0 287
ENST00000416741 GORASP1-022 protein_coding Homo_sapiens 0 484
ENST00000419156 GORASP1-024 nonsense_mediated_decay Homo_sapiens 0 383
ENST00000420940 WDR48-003 nonsense_mediated_decay Homo_sapiens 1e-36 159
ENST00000431601 GORASP1-008 nonsense_mediated_decay Homo_sapiens 0 809
ENST00000437458 GORASP1-021 protein_coding Homo_sapiens 0 520
ENST00000441302 GORASP1-003 retained_intron Homo_sapiens 0 710
ENST00000452389 GORASP1-005 nonsense_mediated_decay Homo_sapiens 0 645
ENST00000453680 GORASP1-007 nonsense_mediated_decay Homo_sapiens 0 710
ENST00000466405 WDR48-005 processed_transcript Homo_sapiens 2e-36 159
ENST00000470910 GORASP1-006 retained_intron Homo_sapiens 0 534
ENST00000479927 GORASP1-002 protein_coding Homo_sapiens 0 726
ENST00000488479 GORASP1-016 retained_intron Homo_sapiens 0 230
ENST00000492064 GORASP1-017 retained_intron Homo_sapiens 0 436
ENST00000493851 GORASP1-020 retained_intron Homo_sapiens 0 436

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