C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 48
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000302313 WDR48-001 ENSG00000114742 9606 + 3:39051998-39096388 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000302313
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000302313 4.766±0.00 3.824±0.00 2.740±0.00 4.259±0.12 4.420±0.97 3.953±0.11 1.949±1.13 3.495±1.44 7.576±0.00 4.478±1.86 1.717±0.00 5.092±1.34 4.921±2.09 20.142±8.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006H1 CIL_0006H1_0001 CGP 3:38845769-39096671

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000724 IEA double-strand break repair via homologous recombination
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005764 IEA lysosome
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0007283 IEA spermatogenesis
GO:0007338 IEA single fertilization
GO:0008584 IEA male gonad development
GO:0016032 IEA viral process
GO:0016579 IDA protein deubiquitination
GO:0035264 IEA multicellular organism growth
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0043588 IEA skin development
GO:0048568 IEA embryonic organ development
GO:0048705 IEA skeletal system morphogenesis
GO:0048872 IEA homeostasis of number of cells
GO:0050679 IEA positive regulation of epithelial cell proliferation
GO:0072520 IEA seminiferous tubule development
GO:1902525 IEA regulation of protein monoubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036561 Wdr48-201 protein_coding Mus_musculus 0 2870
ENSMUST00000035099 Gorasp1-201 protein_coding Mus_musculus 1e-36 159

Loading