C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 48
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000420940 WDR48-003 ENSG00000114742 9606 + 3:39052020-39096671 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000420940
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000420940 3.206±0.00 4.946±0.00 5.870±1.83 5.371±0.00 5.657±0.00 2.080±1.35 3.736±2.69 2.275±0.00 3.476±0.00 1.928±0.86 5.462±0.82 6.382±0.66 20.986±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006H1 CIL_0006H1_0001 CGP 3:38845769-39096671

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000036561 Wdr48-201 protein_coding Mus_musculus 0 2132
ENSMUST00000035099 Gorasp1-201 protein_coding Mus_musculus 1e-36 159

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