C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier organic anion transporter family, member 2a1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035148 Slco2a1-001 ENSMUSG00000032548 10090 + 9:103008002-103090451 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035148
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035148 2.021±0.70 1.363±0.11 2.150±0.89 0.216±0.11 11.174±0.80 10.265±2.93 1.033±0.26 4.576±0.98 4.626±3.25 65.635±5.14 0.266±0.12 13.015±3.54 22.025±21.53 1.521±1.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00019J CIL_00019J_0002 CGP 9:102834917-103096002
CIL_0005UG CIL_0005UG_0002 CGP 9:102988712-103185276

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005887 IC integral component of plasma membrane
GO:0015132 IDA prostaglandin transmembrane transporter activity
GO:0015732 IDA prostaglandin transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310926 SLCO2A1-001 protein_coding Homo_sapiens 0 2036
ENST00000462770 SLCO2A1-003 retained_intron Homo_sapiens 0 758
ENST00000464676 SLCO2A1-002 retained_intron Homo_sapiens 0 765
ENST00000478651 SLCO2A1-005 processed_transcript Homo_sapiens 0 399
ENST00000481359 SLCO2A1-007 nonsense_mediated_decay Homo_sapiens 0 1090
ENST00000493729 SLCO2A1-004 protein_coding Homo_sapiens 0 1360

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