C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: arginyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035458 Ate1-202 ENSMUSG00000030850 10090 - 7:130391526-130519530 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035458
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035458 1.589±0.39 1.621±0.57 3.595±0.72 2.825±1.09 1.709±0.67 1.119±0.43 1.875±0.52 1.944±0.63 1.613±0.77 2.750±1.07 3.126±1.08 2.322±1.48 7.495±2.77 1.460±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WI CIL_0002WI_0002 CGP 7:129591863-133123350
CIL_00095T CIL_00095T_0002 VISTA 7:130125765-130727321
CIL_0001BE CIL_0001BE_0002 CGP 7:130162451-133123350
CIL_0001BD CIL_0001BD_0002 CGP 7:130391526-130573118

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004057 IDA arginyltransferase activity
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0016598 IDA protein arginylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000224652 ATE1-201 protein_coding Homo_sapiens 0 1314
ENST00000369040 ATE1-202 protein_coding Homo_sapiens 0 1291
ENST00000369043 ATE1-001 protein_coding Homo_sapiens 0 1530
ENST00000423243 ATE1-002 protein_coding Homo_sapiens 0 1314
ENST00000481784 ATE1-003 processed_transcript Homo_sapiens 0 207
ENST00000485281 ATE1-005 processed_transcript Homo_sapiens 0.000000000000002 86
ENST00000540606 ATE1-203 protein_coding Homo_sapiens 0 1487
ENST00000543447 ATE1-204 protein_coding Homo_sapiens 0 965

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