C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: son of sevenless homolog 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035773 Sos2-001 ENSMUSG00000034801 10090 - 12:69583766-69681852 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035773
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035773 1.678±0.60 1.307±0.00 1.668±0.00 1.523±0.49 1.309±0.27 1.720±0.00 0.715±0.09 1.289±0.00 1.817±0.42 2.630±1.80 1.117±0.36 0.875±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016A CIL_00016A_0002 CGP 12:69577628-69681852
CIL_0005HL CIL_0005HL_0003 CGP 12:69583762-69724874

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0051057 IEA positive regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000216373 SOS2-001 protein_coding Homo_sapiens 0 5116
ENST00000543680 SOS2-002 protein_coding Homo_sapiens 0 3478
ENST00000555666 SOS2-005 processed_transcript Homo_sapiens 0 599
ENST00000555794 SOS2-003 protein_coding Homo_sapiens 0 1303
ENST00000556452 SOS2-004 nonsense_mediated_decay Homo_sapiens 0 244
ENST00000556469 SOS2-006 processed_transcript Homo_sapiens 0 691

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