C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00016A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100483-ENSG00000100485 CGP 9606 14:50108632-50231558
GeneTranscriptPositionBiotype
ENSG00000100483 (VCPKMT)
valosin containing protein lysine (K) methyltransferase 		ENST00000395859 (VCPKMT-004) 50109537-50116600 protein_coding
ENST00000395860 (VCPKMT-002) 50108633-50116557 protein_coding
ENST00000484763 (VCPKMT-003) 50108642-50116558 retained_intron
ENST00000491402 (VCPKMT-001) 50108633-50116600 nonsense_mediated_decay
ENST00000569518 (VCPKMT-005) 50108632-50116477 retained_intron
ENSG00000100485 (SOS2)
son of sevenless homolog 2 (Drosophila) 		ENST00000216373 (SOS2-001) 50117120-50231558 protein_coding
ENST00000543680 (SOS2-002) 50118310-50231309 protein_coding
ENST00000555666 (SOS2-005) 50199701-50231101 processed_transcript
ENST00000555794 (SOS2-003) 50155892-50180654 protein_coding
ENST00000556452 (SOS2-004) 50201038-50231362 nonsense_mediated_decay
ENST00000556469 (SOS2-006) 50182455-50231254 processed_transcript
CIL_00016A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049882-ENSMUSG00000034801 CGP 10090 12:69577628-69681852
GeneTranscriptPositionBiotype
ENSMUSG00000034801 (Sos2)
son of sevenless homolog 2 (Drosophila) 		ENSMUST00000035773 (Sos2-001) 69583766-69681852 protein_coding
ENSMUST00000182123 (Sos2-002) 69583762-69587119 retained_intron
ENSMUST00000182396 (Sos2-006) 69585089-69681627 protein_coding
ENSMUST00000182646 (Sos2-004) 69585375-69588806 retained_intron
ENSMUST00000182838 (Sos2-005) 69594406-69596822 retained_intron
ENSMUST00000183277 (Sos2-007) 69584853-69681841 protein_coding
ENSMUST00000183306 (Sos2-003) 69614446-69617119 retained_intron
ENSMUSG00000049882 (Vcpkmt)
valosin containing protein lysine (K) methyltransferase 		ENSMUST00000058639 (Vcpkmt-201) 69577628-69583028 protein_coding
ENSMUSG00000065919 (Gm24449)
predicted gene, 24449 		ENSMUST00000083985 (Gm24449-201) 69586153-69586258 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00016A_0001ENSG00000100483ENST00000395859ENST00000395860ENST00000484763ENST00000491402ENST00000569518ENSG00000100485ENST00000216373ENST00000543680ENST00000555666ENST00000555794ENST00000556452ENST00000556469CIL_00016A_0002ENSMUSG00000034801ENSMUST00000035773ENSMUST00000182123ENSMUST00000182396ENSMUST00000182646ENSMUST00000182838ENSMUST00000183277ENSMUST00000183306ENSMUSG00000049882ENSMUST00000058639ENSMUSG00000065919ENSMUST00000083985
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00016A_0001ENSG00000100483ENST00000395859ENST00000395860ENST00000484763ENST00000491402ENST00000569518ENSG00000100485ENST00000216373ENST00000543680CIL_00016A_0002ENSMUSG00000034801ENSMUST00000035773ENSMUST00000182123ENSMUST00000182396ENSMUST00000182838ENSMUST00000183277ENSMUSG00000049882ENSMUST00000058639ENSMUSG00000065919ENSMUST00000083985
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100483 ENST00000395859 N/A N/A N/A N/A N/A N/A N/A N/A 0.600±0.00 N/A 0.866±0.63 N/A N/A 0.766±0.00
ENST00000395860 N/A N/A 0.243±0.00 1.649±0.00 N/A N/A N/A 0.447±0.00 0.537±0.00 N/A N/A 0.634±0.00 0.393±0.19 1.273±0.00
ENST00000484763 0.828±0.00 1.159±0.00 N/A N/A 1.238±0.00 N/A N/A 0.540±0.00 N/A N/A N/A 0.472±0.00 N/A N/A
ENST00000491402 0.259±0.00 2.902±0.00 N/A 1.638±0.88 1.240±0.00 0.621±0.24 0.467±0.00 1.625±0.00 0.649±0.00 1.106±0.00 N/A 0.935±0.18 0.303±0.06 1.908±0.00
ENST00000569518 N/A 0.825±0.00 N/A N/A N/A N/A N/A 0.910±0.00 N/A N/A N/A N/A 0.208±0.12 0.767±0.14
ENSG00000100485 ENST00000216373 5.830±0.00 3.167±0.00 1.265±0.00 4.007±2.59 5.773±2.22 5.846±0.00 4.301±3.52 7.804±0.00 1.699±0.30 4.824±0.18 4.810±2.07 4.397±0.23 2.942±0.51 8.906±0.03
ENST00000543680 N/A N/A 3.255±0.00 4.095±0.00 4.532±0.00 6.300±0.00 3.398±0.00 4.009±0.00 6.040±0.00 3.871±0.00 4.611±0.00 2.529±0.81 1.514±0.00 3.116±0.00
ENST00000555666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034801 ENSMUST00000035773 1.678±0.60 N/A 1.307±0.00 1.668±0.00 1.523±0.49 N/A 1.309±0.27 1.720±0.00 0.715±0.09 1.289±0.00 1.817±0.42 2.630±1.80 1.117±0.36 0.875±0.00
ENSMUST00000182123 2.215±0.00 N/A N/A N/A 3.496±0.00 N/A 1.943±0.07 3.068±0.50 N/A 4.838±1.20 N/A 4.235±1.06 N/A 0.915±0.10
ENSMUST00000182396 N/A N/A N/A N/A N/A N/A N/A N/A 0.714±0.06 N/A 1.542±0.10 3.425±0.00 2.935±0.59 0.426±0.00
ENSMUST00000182646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182838 N/A N/A N/A N/A N/A N/A N/A N/A 1.725±0.39 N/A N/A 3.212±0.00 N/A N/A
ENSMUST00000183277 3.754±0.72 2.899±0.76 5.140±0.50 5.304±0.87 5.285±2.50 2.774±1.08 4.707±0.39 5.859±1.14 2.244±0.71 7.118±0.35 3.316±1.01 4.703±1.79 3.192±0.62 1.791±0.23
ENSMUST00000183306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000049882 ENSMUST00000058639 2.815±0.94 6.738±0.89 4.107±0.10 5.281±1.12 2.957±1.53 3.582±1.28 0.920±0.13 2.913±0.41 3.785±2.45 4.425±0.33 0.982±0.31 5.546±1.32 4.651±1.11 1.953±0.89
ENSMUSG00000065919 ENSMUST00000083985 N/A N/A N/A N/A N/A 3544.200±0.00 N/A 2626.830±0.00 N/A N/A N/A 20.811±0.00 N/A N/A

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