C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acyl-CoA synthetase long-chain family member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035779 Acsl3-001 ENSMUSG00000032883 10090 + 1:78657825-78707743 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035779
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035779 1.501±0.58 1.678±0.17 1.233±0.01 4.273±0.25 1.297±0.20 15.394±4.71 0.311±0.10 1.503±0.61 1.763±0.46 1.974±0.92 0.958±0.28 2.981±1.81 3.461±1.10 3.912±2.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XK CIL_0006XK_0002 CGP 1:78510991-78707743

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004467 IEA long-chain fatty acid-CoA ligase activity
GO:0005524 IEA ATP binding
GO:0005741 IEA mitochondrial outer membrane
GO:0005777 IEA peroxisome
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005811 IEA lipid particle
GO:0006633 IEA fatty acid biosynthetic process
GO:0007420 IEA brain development
GO:0007584 IEA response to nutrient
GO:0014070 IEA response to organic cyclic compound
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0019901 IEA protein kinase binding
GO:0019904 IEA protein domain specific binding
GO:0034379 IEA very-low-density lipoprotein particle assembly
GO:0042998 IEA positive regulation of Golgi to plasma membrane protein transport
GO:0044539 IEA long-chain fatty acid import
GO:0048471 IEA perinuclear region of cytoplasm
GO:0051047 IEA positive regulation of secretion
GO:2001247 IEA positive regulation of phosphatidylcholine biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357430 ACSL3-001 protein_coding Homo_sapiens 0 3360
ENST00000392066 ACSL3-002 protein_coding Homo_sapiens 0 3362
ENST00000407441 ACSL3-007 protein_coding Homo_sapiens 0 610
ENST00000421680 ACSL3-005 protein_coding Homo_sapiens 0 643
ENST00000474422 ACSL3-008 retained_intron Homo_sapiens 0 377
ENST00000495541 ACSL3-009 retained_intron Homo_sapiens 0 736
ENST00000540115 ACSL3-012 protein_coding Homo_sapiens 0 623
ENST00000542810 ACSL3-011 retained_intron Homo_sapiens 0 340

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