C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: EF-hand domain family, member D1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000611312 EFHD1-201 ENSG00000115468 9606 + 2:232662742-232682780 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000611312
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000611312 36.691±0.00 13.705±0.00 4.660±0.00 62.225±54.10 23.571±0.00 18.316±0.00 6.885±0.00 37.265±34.25 17.303±0.00 3.111±1.69 7.800±0.00 20.826±14.56 128.926±41.39 40.088±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HV CIL_0003HV_0001 CGP 2:232550052-232682781
CIL_0003HW CIL_0003HW_0001 CGP 2:232606057-232858627

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027472 Efhd1-001 protein_coding Mus_musculus 0 521
ENSMUST00000118687 Efhd1-002 nonsense_mediated_decay Mus_musculus 0 521
ENSMUST00000036854 Efhd2-001 protein_coding Mus_musculus 0 279
ENSDART00000063779 efhd1-001 protein_coding Danio_rerio 0 226
ENSDART00000128829 efhd2-001 protein_coding Danio_rerio 2.94273e-44 183
ENSDART00000047008 efhd2-002 nonsense_mediated_decay Danio_rerio 2.94273e-44 183

Loading