C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: EF-hand domain family, member D1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264059 EFHD1-001 ENSG00000115468 9606 + 2:232633228-232682781 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264059
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264059 14.741±0.00 1.940±0.00 5.606±0.00 21.755±18.50 5.005±3.97 8.750±0.00 3.204±2.52 28.826±21.32 8.427±0.00 5.548±0.00 6.504±3.78 4.182±3.19 43.681±20.30 12.944±5.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003HV CIL_0003HV_0001 CGP 2:232550052-232682781
CIL_0003HW CIL_0003HW_0001 CGP 2:232606057-232858627

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005739 IEA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0031175 IEA neuron projection development
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027472 Efhd1-001 protein_coding Mus_musculus 0 682
ENSMUST00000118687 Efhd1-002 nonsense_mediated_decay Mus_musculus 0 682
ENSMUST00000036854 Efhd2-001 protein_coding Mus_musculus 0 329
ENSDART00000063779 efhd1-001 protein_coding Danio_rerio 0 237
ENSDART00000128829 efhd2-001 protein_coding Danio_rerio 0 217
ENSDART00000047008 efhd2-002 nonsense_mediated_decay Danio_rerio 0 217

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