C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 167
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000572382 RNF167-016 ENSG00000108523 9606 + 17:4942619-4945209 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungTestisENST00000572382
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Testis
ENST00000572382 15.493±0.00 25.479±0.00 26.842±0.00 22.922±0.00 39.074±0.00 30.852±0.00 15.164±0.00 13.693±0.00 30.637±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004WE CIL_0004WE_0001 CGP 17:4932297-4940251
CIL_00009G CIL_00009G_0001 CGP 17:4937130-4945222
CIL_0000C6 CIL_0000C6_0001 CGP 17:4940008-4949061

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037534 Rnf167-001 protein_coding Mus_musculus 0 579
ENSMUST00000141695 Rnf167-007 nonsense_mediated_decay Mus_musculus 0 579
ENSMUST00000151034 Rnf167-005 retained_intron Mus_musculus 0 388
ENSMUST00000152458 Rnf167-009 retained_intron Mus_musculus 0 244
ENSMUST00000152276 Rnf167-002 retained_intron Mus_musculus 0 243
ENSMUST00000141237 Rnf167-010 retained_intron Mus_musculus 8e-34 148

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