C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037798 Slc24a1-201 ENSMUSG00000034452 10090 - 9:64922861-64951607 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037798
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037798 0.039±0.01 0.007±0.00 0.032±0.02 0.071±0.05 0.013±0.00 0.014±0.00 0.012±0.00 0.048±0.07 0.038±0.02 0.009±0.00 0.068±0.03 0.067±0.06 0.699±1.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006816 IEA calcium ion transport
GO:0007601 IEA visual perception
GO:0008273 IEA calcium, potassium:sodium antiporter activity
GO:0016021 IEA integral component of membrane
GO:0035725 IEA sodium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261892 SLC24A1-001 protein_coding Homo_sapiens 0 1151
ENST00000339868 SLC24A1-201 protein_coding Homo_sapiens 0 1151
ENST00000393265 SLC24A4-003 protein_coding Homo_sapiens 0.000000000000002 90
ENST00000399033 SLC24A1-004 protein_coding Homo_sapiens 0 1151
ENST00000425561 SLC24A1-008 processed_transcript Homo_sapiens 0.000000001 68
ENST00000434116 SLC24A1-003 retained_intron Homo_sapiens 0 811
ENST00000449142 SLC24A1-006 processed_transcript Homo_sapiens 0 894
ENST00000505666 SLC24A1-011 protein_coding Homo_sapiens 1e-20 104
ENST00000525557 SLC24A4-007 protein_coding Homo_sapiens 0.000000000000002 90
ENST00000531433 SLC24A4-002 protein_coding Homo_sapiens 0.000000000000002 90
ENST00000532405 SLC24A4-001 protein_coding Homo_sapiens 0.000000000000005 90
ENST00000537259 SLC24A1-002 protein_coding Homo_sapiens 0 811
ENST00000544319 SLC24A1-007 protein_coding Homo_sapiens 0 863
ENST00000546330 SLC24A1-005 protein_coding Homo_sapiens 0 863

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