C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: syntaxin binding protein 5 (tomosyn)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000367480 STXBP5-003 ENSG00000164506 9606 + 6:147204533-147384755 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverLungOvaryPlacentaTestisENST00000367480
Transcript ID Liver Lung Ovary Placenta Testis
ENST00000367480 0.205±0.00 1.077±0.00 1.558±0.00 0.728±0.00 8.285±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005892 ISS acetylcholine-gated channel complex
GO:0010468 IMP regulation of gene expression
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane
GO:0016192 IEA vesicle-mediated transport
GO:0017075 ISS syntaxin-1 binding
GO:0017157 TAS regulation of exocytosis
GO:0030054 IEA cell junction
GO:0030193 IMP regulation of blood coagulation
GO:0031410 IEA cytoplasmic vesicle
GO:0045202 IEA synapse
GO:0045921 ISS positive regulation of exocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000125200 Stxbp5-003 protein_coding Mus_musculus 0 4047
ENSMUST00000141722 Stxbp5-002 protein_coding Mus_musculus 0 2832
ENSMUST00000038213 Stxbp5-001 protein_coding Mus_musculus 0 2832
ENSMUST00000136259 Stxbp5-005 retained_intron Mus_musculus 0 1219
ENSMUST00000151435 Stxbp5-004 processed_transcript Mus_musculus 0 1219
ENSMUST00000131828 Stxbp5-006 retained_intron Mus_musculus 0 789
ENSMUST00000136324 Stxbp5-007 protein_coding Mus_musculus 0 553
ENSMUST00000139199 Stxbp5-010 retained_intron Mus_musculus 0 475
ENSMUST00000128487 Stxbp5-009 retained_intron Mus_musculus 0 329
ENSMUST00000148009 Stxbp5-011 retained_intron Mus_musculus 0 294

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