C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 222
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038214 Krt222-002 ENSMUSG00000035849 10090 - 11:99233890-99244085 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000038214
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000038214 0.323±0.24 0.086±0.03 0.061±0.00 4.400±0.00 0.321±0.09 0.110±0.05 0.106±0.03 0.037±0.01 0.309±0.12 0.134±0.05 0.052±0.01 0.066±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004QH CIL_0004QH_0002 CGP 11:99209047-99244085
CIL_0000TP CIL_0000TP_0003 CGP 11:99232761-99285262

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000394049 KRT222-002 nonsense_mediated_decay Homo_sapiens 0 1157
ENST00000394052 KRT222-001 protein_coding Homo_sapiens 0 839
ENST00000476049 KRT222-001 nonsense_mediated_decay Homo_sapiens 0 839
ENST00000580719 KRT222-004 nonsense_mediated_decay Homo_sapiens 0 320
ENST00000581564 KRT222-003 nonsense_mediated_decay Homo_sapiens 0 780

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