C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dexamethasone-induced transcript
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038281 Dexi-001 ENSMUSG00000038055 10090 - 16:10530207-10543054 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038281
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038281 16.969±2.87 25.385±5.07 17.505±0.68 17.188±1.23 23.967±8.19 21.564±1.90 24.254±4.26 15.318±1.11 15.443±11.51 20.134±1.15 23.632±2.09 30.359±8.67 3.914±1.43 5.224±2.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000750 CIL_000750_0002 CGP 16:10420557-10527564
CIL_000751 CIL_000751_0002 CGP 16:10488178-10543054
CIL_00059N CIL_00059N_0002 CGP 16:10502531-10744878

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000331808 DEXI-001 protein_coding Homo_sapiens 0 601
ENST00000430589 RP11-578F21.10-002 processed_transcript Homo_sapiens 0 383
ENST00000431496 AC055876.1-001 transcribed_processed_pseudogene Homo_sapiens 0 381
ENST00000469379 DEXI-002 protein_coding Homo_sapiens 0 601
ENST00000612222 AC138649.1-001 processed_pseudogene Homo_sapiens 0 381

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