C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000751_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000179583-ENSG00000182108 CGP 9606 16:10877198-10942460
GeneTranscriptPositionBiotype
ENSG00000179583 (CIITA)
class II, major histocompatibility complex, transactivator 		ENST00000324288 (CIITA-001) 10877198-10932281 protein_coding
ENST00000381835 (CIITA-002) 10877210-10924437 protein_coding
ENST00000537380 (CIITA-005) 10877331-10910243 processed_transcript
ENST00000570546 (CIITA-003) 10877210-10924804 retained_intron
ENST00000571186 (CIITA-006) 10877223-10902722 nonsense_mediated_decay
ENST00000571190 (CIITA-007) 10901559-10902037 retained_intron
ENST00000571545 (CIITA-012) 10928164-10932222 processed_transcript
ENST00000572665 (CIITA-009) 10915646-10917010 processed_transcript
ENST00000573309 (CIITA-004) 10877216-10908887 retained_intron
ENST00000575513 (CIITA-010) 10922925-10923992 retained_intron
ENST00000576601 (CIITA-008) 10878969-10902160 protein_coding
ENST00000611587 (CIITA-201) 10877216-10908887 protein_coding
ENST00000618207 (CIITA-202) 10877198-10924983 protein_coding
ENST00000618327 (CIITA-203) 10877198-10924983 protein_coding
ENSG00000182108 (DEXI)
Dexi homolog (mouse) 		ENST00000331808 (DEXI-001) 10928891-10942460 protein_coding
ENST00000469379 (DEXI-002) 10928891-10942131 protein_coding
ENST00000570992 (DEXI-003) 10928942-10941718 processed_transcript
ENSG00000262222 (RP11-876N24.4)
 ENST00000573379 (RP11-876N24.4-001) 10940719-10943021 antisense
ENSG00000263013 (RP11-876N24.5)
 ENST00000570440 (RP11-876N24.5-001) 10938886-10940044 sense_intronic
ENSG00000280153 (RP11-876N24.3)
 ENST00000625054 (RP11-876N24.3-001) 10933903-10936280 TEC
CIL_000751_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022504-ENSMUSG00000038055 CGP 10090 16:10488178-10543054
GeneTranscriptPositionBiotype
ENSMUSG00000022504 (Ciita)
class II transactivator 		ENSMUST00000023147 (Ciita-201) 10488178-10527564 protein_coding
ENSMUSG00000038055 (Dexi)
dexamethasone-induced transcript 		ENSMUST00000038281 (Dexi-001) 10530207-10543054 protein_coding
ENSMUST00000183355 (Dexi-003) 10530207-10531809 processed_transcript
ENSMUST00000184863 (Dexi-002) 10502531-10543054 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000751_0001ENSG00000179583ENST00000324288ENST00000381835ENST00000537380ENST00000570546ENST00000571186ENST00000571190ENST00000571545ENST00000572665ENST00000573309ENST00000575513ENST00000576601ENST00000611587ENST00000618207ENST00000618327ENSG00000182108ENST00000331808ENST00000469379ENST00000570992ENSG00000262222ENST00000573379ENSG00000263013ENST00000570440ENSG00000280153ENST00000625054CIL_000751_0002ENSMUSG00000022504ENSMUST00000023147ENSMUSG00000038055ENSMUST00000038281ENSMUST00000183355ENSMUST00000184863
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000751_0001ENSG00000179583ENST00000324288ENST00000537380ENST00000570546ENST00000611587ENST00000618207ENST00000618327ENSG00000182108ENST00000331808ENST00000469379ENST00000570992ENSG00000262222ENST00000573379ENSG00000263013ENST00000570440ENSG00000280153ENST00000625054CIL_000751_0002ENSMUSG00000022504ENSMUST00000023147ENSMUSG00000038055ENSMUST00000038281ENSMUST00000183355
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000179583 ENST00000324288 N/A 6.318±0.00 N/A 0.463±0.00 N/A 0.496±0.19 0.505±0.00 N/A N/A N/A 0.234±0.00 0.948±0.29 N/A N/A
ENST00000381835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537380 N/A N/A 4.448±0.00 N/A 4.924±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570546 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.269±0.00 N/A N/A N/A N/A
ENST00000571186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000611587 N/A N/A N/A N/A 1.522±0.00 N/A 0.670±0.00 N/A N/A 2.042±0.00 N/A N/A N/A N/A
ENST00000618207 N/A N/A N/A N/A N/A N/A N/A N/A 1.547±0.00 N/A N/A N/A N/A N/A
ENST00000618327 N/A N/A N/A N/A N/A N/A N/A 0.652±0.00 N/A 4.701±0.00 N/A 0.768±0.00 1.147±0.00 N/A
ENSG00000182108 ENST00000331808 9.154±0.00 38.031±0.00 N/A 7.324±4.11 15.533±0.00 11.567±0.00 12.500±10.52 9.722±6.73 42.012±0.00 19.802±0.00 13.211±7.48 12.682±11.44 9.166±4.11 8.293±5.35
ENST00000469379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.986±0.00 2.839±0.00
ENST00000570992 9.647±0.00 N/A 9.221±0.00 3.157±0.00 N/A 14.437±0.00 19.135±0.00 12.812±2.69 N/A N/A 20.047±0.99 9.974±4.26 13.293±0.59 7.378±3.09
ENSG00000262222 ENST00000573379 3.685±0.00 N/A N/A 2.463±1.37 7.600±0.00 4.013±0.00 5.133±4.08 6.684±0.00 10.231±0.00 10.398±0.00 6.052±3.14 1.872±0.00 4.741±2.41 2.774±1.29
ENSG00000263013 ENST00000570440 0.558±0.00 0.718±0.00 0.719±0.00 0.155±0.04 0.544±0.13 0.734±0.26 0.281±0.04 1.272±0.38 0.339±0.16 1.076±0.65 0.486±0.03 0.938±0.46 0.494±0.34 1.059±0.36
ENSG00000280153 ENST00000625054 N/A N/A N/A N/A 1.917±0.00 N/A 0.531±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022504 ENSMUST00000023147 2.954±0.00 N/A 1.462±0.20 N/A 13.902±7.62 2.775±0.17 N/A 1.260±0.36 N/A 4.221±1.34 1.474±0.00 1.861±0.38 0.241±0.00 N/A
ENSMUSG00000038055 ENSMUST00000038281 16.969±2.87 25.385±5.07 17.505±0.68 17.188±1.23 23.967±8.19 21.564±1.90 24.254±4.26 15.318±1.11 15.443±11.51 20.134±1.15 23.632±2.09 30.359±8.67 3.914±1.43 5.224±2.30
ENSMUST00000183355 N/A N/A N/A 12.830±0.00 N/A N/A N/A N/A N/A N/A N/A 8.023±0.00 1.899±0.31 0.948±0.00
ENSMUST00000184863 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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