C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon regulatory factor 2 binding protein-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038422 Irf2bpl-201 ENSMUSG00000034168 10090 - 12:86880703-86884814 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038422
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038422 16.971±3.23 41.424±3.94 17.907±1.01 27.807±9.72 23.201±12.07 25.769±2.77 7.657±1.65 11.456±1.45 3.169±1.22 26.262±5.22 6.773±1.05 26.890±8.81 4.469±2.76 1.428±0.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VF CIL_0007VF_0002 VISTA 12:86500572-87103602
CIL_0008WP CIL_0008WP_0002 VISTA 12:86510598-87113301
CIL_000867 CIL_000867_0002 VISTA 12:86515545-87117582
CIL_0007VT CIL_0007VT_0002 VISTA 12:86594665-87199694
CIL_00076Y CIL_00076Y_0002 CGP 12:86734383-86884814
CIL_0003P0 CIL_0003P0_0002 CGP 12:86880703-86965362

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003674 ND molecular_function
GO:0005615 IEA extracellular space
GO:0005634 ISS nucleus
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046543 IEA development of secondary female sexual characteristics
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000238647 IRF2BPL-001 protein_coding Homo_sapiens 0 3452
ENST00000366609 IRF2BP2-002 protein_coding Homo_sapiens 0 207
ENST00000366610 IRF2BP2-001 protein_coding Homo_sapiens 0 207

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