C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon regulatory factor 2 binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366610 IRF2BP2-001 ENSG00000168264 9606 - 1:234604269-234609525 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366610
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366610 6.381±0.00 5.309±0.00 2.793±0.00 3.371±0.00 5.328±3.21 9.785±5.03 5.680±0.00 3.524±0.00 4.454±0.44 5.808±4.26 3.184±1.56 10.831±3.61 4.494±0.38 5.597±3.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X4 CIL_0007X4_0001 VISTA 1:234243002-234844954
CIL_0006KE CIL_0006KE_0001 CGP 1:234391313-234609525

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054960 Irf2bp2-001 protein_coding Mus_musculus 0 1188
ENSMUST00000038422 Irf2bpl-201 protein_coding Mus_musculus 0 207

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