C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon regulatory factor 2 binding protein-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000238647 IRF2BPL-001 ENSG00000119669 9606 - 14:77024543-77028699 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000238647
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000238647 17.922±0.00 13.443±0.00 1.351±0.00 8.581±6.30 11.534±9.59 10.411±9.79 3.154±2.41 13.965±13.10 6.114±3.37 16.621±15.42 4.645±4.49 24.855±21.09 17.719±2.33 21.752±4.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VF CIL_0007VF_0001 VISTA 14:76618298-77221354
CIL_0008WP CIL_0008WP_0001 VISTA 14:76629854-77233554
CIL_000867 CIL_000867_0001 VISTA 14:76636452-77239164
CIL_0007VT CIL_0007VT_0001 VISTA 14:76740528-77345010
CIL_00076Y CIL_00076Y_0001 CGP 14:76826372-77028699
CIL_0003P0 CIL_0003P0_0001 CGP 14:77024543-77117287

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003674 ND molecular_function
GO:0005615 IDA extracellular space
GO:0005634 NAS nucleus
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046543 ISS development of secondary female sexual characteristics
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038422 Irf2bpl-201 protein_coding Mus_musculus 0 3452
ENSMUST00000121615 Gm11950-001 processed_pseudogene Mus_musculus 0 931
ENSMUST00000121627 Gm12291-001 processed_pseudogene Mus_musculus 0 464
ENSMUST00000054960 Irf2bp2-001 protein_coding Mus_musculus 0 209

Loading