C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exosome component 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038474 Exosc2-001 ENSMUSG00000039356 10090 + 2:31670715-31681350 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleOvaryPlacentaTestisENSMUST00000038474
Transcript ID Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000038474 12.929±2.42 23.092±9.46 5.173±0.68 15.184±0.90 15.343±6.79 4.074±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000936 CIL_000936_0002 VISTA 2:31199311-31800827
CIL_0008XQ CIL_0008XQ_0002 VISTA 2:31340644-31941311
CIL_0006IB CIL_0006IB_0002 CGP 2:31640037-31681350
CIL_0007CW CIL_0007CW_0003 CGP 2:31670715-31804227

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000178 ISS exosome (RNase complex)
GO:0003674 ND molecular_function
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006364 IEA rRNA processing
GO:0030307 IEA positive regulation of cell growth

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372350 EXOSC2-005 protein_coding Homo_sapiens 0 579
ENST00000372352 EXOSC2-006 protein_coding Homo_sapiens 0 918
ENST00000372358 EXOSC2-001 protein_coding Homo_sapiens 0 1053
ENST00000463488 EXOSC2-010 processed_transcript Homo_sapiens 0 468
ENST00000495699 EXOSC2-003 protein_coding Homo_sapiens 0 468
ENST00000546165 EXOSC2-201 protein_coding Homo_sapiens 0 525

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