C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAH (Asp-Glu-Ala-His) box polypeptide 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039152 Dhx8-001 ENSMUSG00000034931 10090 + 11:101732950-101767358 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039152
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039152 4.682±1.38 1.612±0.47 5.412±0.25 11.282±0.93 3.827±1.32 3.970±0.44 1.399±0.40 3.391±0.97 3.684±2.99 4.563±0.25 2.760±0.34 6.969±5.82 16.001±7.71 10.566±6.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000996 CIL_000996_0002 VISTA 11:101501412-102102123
CIL_00090X CIL_00090X_0002 VISTA 11:101529827-102131014
CIL_000997 CIL_000997_0002 VISTA 11:101567301-102168287
CIL_00047L CIL_00047L_0002 CGP 11:101665541-101767358
CIL_000495 CIL_000495_0002 CGP 11:101732919-101785371

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0006200 IEA ATP catabolic process
GO:0006397 IEA mRNA processing
GO:0008026 IEA ATP-dependent helicase activity
GO:0008380 IEA RNA splicing
GO:0042802 IEA identical protein binding
GO:0044822 IEA poly(A) RNA binding
GO:0071013 IEA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262415 DHX8-001 protein_coding Homo_sapiens 0 3975
ENST00000540306 DHX8-002 protein_coding Homo_sapiens 0 3746
ENST00000587044 DHX8-003 retained_intron Homo_sapiens 0 2846
ENST00000589898 DHX8-006 protein_coding Homo_sapiens 0 484
ENST00000592258 DHX8-005 nonsense_mediated_decay Homo_sapiens 0 333

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