C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: immunoglobulin superfamily, member 21
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039331 Igsf21-001 ENSMUSG00000040972 10090 - 4:140026846-140246784 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039331
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039331 0.257±0.01 0.335±0.19 0.262±0.10 11.606±4.50 0.092±0.03 0.524±0.14 0.222±0.11 0.099±0.04 0.025±0.01 0.091±0.03 0.059±0.03 0.158±0.07 0.036±0.02 0.181±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CW CIL_0008CW_0002 VISTA 4:139530774-140132378
CIL_00098Z CIL_00098Z_0002 VISTA 4:139710918-140312273
CIL_0009A2 CIL_0009A2_0002 VISTA 4:139918145-140519643
CIL_000327 CIL_000327_0002 CGP 4:140026846-140666012

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005576 IEA extracellular region
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000251296 IGSF21-001 protein_coding Homo_sapiens 0 1844
ENST00000412684 IGSF21-002 protein_coding Homo_sapiens 0 1044
ENST00000497331 IGSF21-003 retained_intron Homo_sapiens 0 1192

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