C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000327_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000031049-ENSDARG00000088630 CGP 7955 11:29519756-30428820
GeneTranscriptPositionBiotype
ENSDARG00000031049 (igsf21a)
immunoglobin superfamily, member 21a 		ENSDART00000041443 (igsf21a-001) 29520447-29666109 protein_coding
ENSDART00000123245 (igsf21a-201) 29519756-29958829 protein_coding
ENSDART00000140871 (igsf21a-002) 29787893-29959037 protein_coding
ENSDARG00000070709 (wu:fi42e03)
wu:fi42e03 		ENSDART00000103388 (wu:fi42e03-201) 30415872-30416933 protein_coding
ENSDARG00000079546 (BX548000.1)
Uncharacterized protein 		ENSDART00000112721 (BX548000.1-201) 30419157-30428016 protein_coding
ENSDARG00000083615 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000118423 (5S_rRNA.292-201) 30228941-30229061 rRNA
ENSDARG00000088630 (ARHGEF10L (2 of 2))
Rho guanine nucleotide exchange factor (GEF) 10-like 		ENSDART00000131165 (ARHGEF10L (2 of 2)-201) 30211398-30428820 protein_coding
CIL_000327_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040972-ENSMUSG00000040964 CGP 10090 4:140026846-140666012
GeneTranscriptPositionBiotype
ENSMUSG00000040964 (Arhgef10l)
Rho guanine nucleotide exchange factor (GEF) 10-like 		ENSMUST00000039204 (Arhgef10l-007) 140514485-140648750 protein_coding
ENSMUST00000069623 (Arhgef10l-001) 140514485-140666012 protein_coding
ENSMUST00000097820 (Arhgef10l-002) 140514485-140648756 protein_coding
ENSMUST00000105797 (Arhgef10l-005) 140514485-140581818 protein_coding
ENSMUST00000105798 (Arhgef10l-004) 140514485-140584343 protein_coding
ENSMUST00000105799 (Arhgef10l-003) 140514485-140648750 protein_coding
ENSMUST00000125045 (Arhgef10l-011) 140580865-140592040 retained_intron
ENSMUST00000138493 (Arhgef10l-006) 140514485-140577094 nonsense_mediated_decay
ENSMUST00000140403 (Arhgef10l-010) 140544314-140568381 nonsense_mediated_decay
ENSMUST00000143614 (Arhgef10l-012) 140591932-140649360 protein_coding
ENSMUST00000147426 (Arhgef10l-009) 140575426-140581802 protein_coding
ENSMUST00000154979 (Arhgef10l-008) 140593169-140617065 protein_coding
ENSMUSG00000040972 (Igsf21)
immunoglobulin superfamily, member 21 		ENSMUST00000039331 (Igsf21-001) 140026846-140246784 protein_coding
ENSMUSG00000085047 (Gm13026)
predicted gene 13026 		ENSMUST00000140113 (Gm13026-001) 140437963-140461291 lincRNA
ENSMUSG00000085968 (Gm13027)
predicted gene 13027 		ENSMUST00000135858 (Gm13027-001) 140131877-140133351 antisense
ENSMUSG00000086164 (Gm13029)
predicted gene 13029 		ENSMUST00000137283 (Gm13029-001) 140142873-140144633 antisense
ENSMUSG00000086437 (Gm13021)
predicted gene 13021 		ENSMUST00000135716 (Gm13021-001) 140424644-140431931 lincRNA
ENSMUSG00000086960 (Gm13017)
predicted gene 13017 		ENSMUST00000156409 (Gm13017-001) 140391148-140396604 lincRNA
ENSMUSG00000087084 (Gm13016)
predicted gene 13016 		ENSMUST00000126252 (Gm13016-001) 140380630-140385574 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000327_0001ENSDARG00000031049ENSDART00000041443ENSDART00000123245ENSDART00000140871ENSDARG00000070709ENSDART00000103388ENSDARG00000079546ENSDART00000112721ENSDARG00000083615ENSDART00000118423ENSDARG00000088630ENSDART00000131165CIL_000327_0002ENSMUSG00000040964ENSMUST00000039204ENSMUST00000069623ENSMUST00000097820ENSMUST00000105797ENSMUST00000105798ENSMUST00000105799ENSMUST00000125045ENSMUST00000138493ENSMUST00000140403ENSMUST00000143614ENSMUST00000147426ENSMUST00000154979ENSMUSG00000040972ENSMUST00000039331ENSMUSG00000085047ENSMUST00000140113ENSMUSG00000085968ENSMUST00000135858ENSMUSG00000086164ENSMUST00000137283ENSMUSG00000086437ENSMUST00000135716ENSMUSG00000086960ENSMUST00000156409ENSMUSG00000087084ENSMUST00000126252
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000327_0001ENSDARG00000031049ENSDART00000041443ENSDART00000123245ENSDARG00000070709ENSDART00000103388ENSDARG00000079546ENSDART00000112721ENSDARG00000083615ENSDART00000118423ENSDARG00000088630ENSDART00000131165CIL_000327_0002ENSMUSG00000040964ENSMUST00000039204ENSMUST00000069623ENSMUST00000097820ENSMUST00000105797ENSMUST00000105798ENSMUST00000105799ENSMUST00000125045ENSMUST00000138493ENSMUST00000147426ENSMUST00000154979ENSMUSG00000040972ENSMUST00000039331ENSMUSG00000085047ENSMUST00000140113ENSMUSG00000085968ENSMUST00000135858ENSMUSG00000086164ENSMUST00000137283ENSMUSG00000086437ENSMUST00000135716ENSMUSG00000086960ENSMUST00000156409ENSMUSG00000087084ENSMUST00000126252
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000031049 ENSDART00000041443 N/A N/A N/A N/A N/A N/A N/A N/A 0.021±0.00 N/A 0.451±0.00 N/A N/A N/A
ENSDART00000123245 N/A N/A N/A 23.239±16.91 N/A N/A 1.021±0.72 0.744±0.49 N/A N/A 0.624±0.00 N/A N/A N/A
ENSDART00000140871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000070709 ENSDART00000103388 N/A N/A N/A 2.276±2.94 N/A N/A 0.810±0.67 106.074±146.35 12.366±0.00 N/A 0.447±0.00 N/A N/A N/A
ENSDARG00000079546 ENSDART00000112721 N/A N/A N/A 0.193±0.05 N/A N/A 0.136±0.01 N/A N/A N/A 0.235±0.00 N/A N/A N/A
ENSDARG00000083615 ENSDART00000118423 N/A N/A N/A 43.688±0.00 N/A N/A N/A N/A N/A N/A 13.096±0.00 N/A N/A N/A
ENSDARG00000088630 ENSDART00000131165 N/A N/A N/A 3.095±0.00 N/A N/A 0.316±0.02 0.157±0.09 0.017±0.00 N/A 0.403±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040964 ENSMUST00000039204 N/A N/A N/A 8.560±1.93 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.926±0.67
ENSMUST00000069623 1.976±0.14 1.311±0.00 5.050±1.23 N/A 8.258±2.92 13.728±2.18 N/A 4.730±0.44 N/A 3.503±0.61 4.811±0.20 3.445±1.32 0.800±0.08 N/A
ENSMUST00000097820 2.976±1.45 2.908±1.35 3.576±0.00 2.220±0.64 0.447±0.00 5.561±0.71 7.497±1.88 8.668±3.39 1.855±0.87 4.145±0.94 2.936±0.61 11.233±4.24 2.576±1.26 0.434±0.12
ENSMUST00000105797 N/A N/A N/A N/A 2.613±0.53 N/A 4.570±0.33 N/A 0.484±0.02 2.304±0.49 3.748±0.54 N/A N/A N/A
ENSMUST00000105798 N/A 0.847±0.00 N/A N/A 1.538±0.00 N/A 6.460±0.00 N/A 3.278±0.21 N/A 5.449±2.86 2.530±0.00 N/A 0.682±0.00
ENSMUST00000105799 N/A N/A N/A 3.470±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125045 N/A N/A N/A 13.222±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.825±0.00
ENSMUST00000138493 N/A 1.897±0.63 N/A 9.394±0.00 N/A 6.244±0.00 N/A N/A 3.351±0.25 N/A N/A 5.411±0.00 4.058±3.80 1.040±0.00
ENSMUST00000140403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147426 N/A N/A N/A N/A 9.507±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154979 N/A N/A N/A N/A N/A N/A N/A N/A 15.670±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000040972 ENSMUST00000039331 0.257±0.01 0.335±0.19 0.262±0.10 11.606±4.50 0.092±0.03 0.524±0.14 0.222±0.11 0.099±0.04 0.025±0.01 0.091±0.03 0.059±0.03 0.158±0.07 0.036±0.02 0.181±0.03
ENSMUSG00000085047 ENSMUST00000140113 N/A N/A N/A 0.015±0.00 N/A 0.182±0.00 N/A N/A N/A N/A N/A N/A 0.138±0.12 N/A
ENSMUSG00000085968 ENSMUST00000135858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.330±0.00
ENSMUSG00000086164 ENSMUST00000137283 N/A 0.191±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.154±0.07 0.136±0.06
ENSMUSG00000086437 ENSMUST00000135716 N/A N/A N/A N/A N/A N/A N/A N/A 0.326±0.00 0.512±0.16 N/A N/A N/A 0.455±0.16
ENSMUSG00000086960 ENSMUST00000156409 N/A N/A N/A N/A N/A N/A N/A N/A 0.132±0.01 N/A N/A N/A N/A N/A
ENSMUSG00000087084 ENSMUST00000126252 0.014±0.00 0.027±0.00 N/A 0.077±0.02 0.041±0.00 N/A N/A N/A N/A N/A N/A 0.058±0.01 0.014±0.01 0.077±0.04

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