C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 2410004B18 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039571 2410004B18Rik-001 ENSMUSG00000036873 10090 + 3:145938014-145944829 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039571
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039571 3.186±0.25 3.163±0.65 3.570±2.37 8.515±3.51 2.276±0.60 4.239±1.26 3.572±0.40 3.417±0.64 2.316±1.45 4.499±1.33 6.327±0.74 5.321±2.08 5.459±2.99 2.516±0.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QR CIL_0007QR_0002 VISTA 3:145664099-146264929

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294661 C1orf52-003 processed_transcript Homo_sapiens 0 549
ENST00000471115 C1orf52-001 protein_coding Homo_sapiens 0 741

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