C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: acetyl-Coenzyme A acyltransferase 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039784 Acaa1a-001 ENSMUSG00000036138 10090 + 9:119341294-119350299 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039784
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039784 38.518±9.14 22.048±1.75 41.505±4.96 19.327±8.58 30.959±7.09 39.158±2.89 22.276±3.21 57.866±9.91 38.626±16.52 37.439±5.87 11.658±2.39 34.758±9.75 43.572±19.40 2.748±0.41

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BE CIL_0008BE_0002 VISTA 9:119196374-119798584
CIL_000131 CIL_000131_0002 CGP 9:119238432-119341411

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003985 TAS acetyl-CoA C-acetyltransferase activity
GO:0005739 IDA mitochondrion
GO:0005777 TAS peroxisome
GO:0006631 TAS:IEA fatty acid metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301810 ACAA1-002 protein_coding Homo_sapiens 0 411
ENST00000333167 ACAA1-001 protein_coding Homo_sapiens 0 1338
ENST00000411549 ACAA1-003 nonsense_mediated_decay Homo_sapiens 0 396
ENST00000418880 ACAA1-017 nonsense_mediated_decay Homo_sapiens 0 209
ENST00000421218 ACAA1-014 protein_coding Homo_sapiens 0 730
ENST00000423611 ACAA1-009 nonsense_mediated_decay Homo_sapiens 0 396
ENST00000440176 ACAA1-004 nonsense_mediated_decay Homo_sapiens 0 396
ENST00000447223 ACAA1-013 nonsense_mediated_decay Homo_sapiens 0 597
ENST00000450296 ACAA1-007 protein_coding Homo_sapiens 0 931
ENST00000452171 ACAA1-019 protein_coding Homo_sapiens 0 496
ENST00000469559 ACAA1-006 retained_intron Homo_sapiens 0 555
ENST00000480865 ACAA1-005 processed_transcript Homo_sapiens 0 555

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