C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aldehyde dehydrogenase 4 family, member A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039818 Aldh4a1-001 ENSMUSG00000028737 10090 + 4:139622866-139649690 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039818
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039818 34.415±1.24 139.794±9.99 12.471±1.15 9.589±0.26 49.533±9.32 15.766±2.34 52.559±2.28 245.490±24.40 154.957±119.37 19.787±1.48 40.011±1.94 25.902±7.55 16.251±5.23 3.397±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CW CIL_0008CW_0002 VISTA 4:139530774-140132378
CIL_0002WB CIL_0002WB_0003 CGP 4:139603186-139662691

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0006537 IEA glutamate biosynthetic process
GO:0006561 IEA proline biosynthetic process
GO:0010133 IEA proline catabolic process to glutamate
GO:0016620 IEA oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0042802 IEA identical protein binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290597 ALDH4A1-002 protein_coding Homo_sapiens 0 1901
ENST00000375341 ALDH4A1-001 protein_coding Homo_sapiens 0 1901
ENST00000494072 RP13-279N23.2-001 nonsense_mediated_decay Homo_sapiens 0 1290
ENST00000538309 ALDH4A1-005 protein_coding Homo_sapiens 0 1869
ENST00000538839 ALDH4A1-201 protein_coding Homo_sapiens 0 1369

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