C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aldehyde dehydrogenase 4 family, member A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000538839 ALDH4A1-201 ENSG00000159423 9606 - 1:18871432-18902528 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000538839
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000538839 4.050±0.00 1.548±0.00 9.762±0.00 12.346±11.71 4.019±0.00 27.464±23.05 95.355±0.00 3.752±0.00 3.029±1.88 4.054±0.00 8.378±2.52 1.789±0.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CW CIL_0008CW_0001 VISTA 1:18332177-18933790
CIL_0002WB CIL_0002WB_0002 CGP 1:18849273-18921121

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003842 EXP 1-pyrroline-5-carboxylate dehydrogenase activity
GO:0004029 TAS aldehyde dehydrogenase (NAD) activity
GO:0005759 TAS mitochondrial matrix
GO:0006537 IEA glutamate biosynthetic process
GO:0006560 TAS proline metabolic process
GO:0006561 IEA proline biosynthetic process
GO:0006562 TAS proline catabolic process
GO:0008152 IEA metabolic process
GO:0009055 TAS electron carrier activity
GO:0010133 IEA proline catabolic process to glutamate
GO:0016491 IEA oxidoreductase activity
GO:0019470 TAS 4-hydroxyproline catabolic process
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0042802 IPI identical protein binding
GO:0044281 TAS small molecule metabolic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039818 Aldh4a1-001 protein_coding Mus_musculus 0 1369
ENSMUST00000146309 Aldh4a1-002 processed_transcript Mus_musculus 0 1059
ENSMUST00000178644 Gm21969-001 nonsense_mediated_decay Mus_musculus 0 902

Loading