C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aldehyde dehydrogenase 4 family, member A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375341 ALDH4A1-001 ENSG00000159423 9606 - 1:18871432-18902781 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000375341
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000375341 2.935±0.00 1.593±0.00 8.164±0.00 8.868±0.00 12.739±0.00 4.374±0.00 21.065±13.10 33.821±31.81 6.183±2.56 6.015±1.81 10.962±3.08 1.549±0.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CW CIL_0008CW_0001 VISTA 1:18332177-18933790
CIL_0002WB CIL_0002WB_0002 CGP 1:18849273-18921121

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003842 EXP:IEA 1-pyrroline-5-carboxylate dehydrogenase activity
GO:0004029 TAS aldehyde dehydrogenase (NAD) activity
GO:0005739 IEA mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0006537 IEA glutamate biosynthetic process
GO:0006560 TAS proline metabolic process
GO:0006561 IEA proline biosynthetic process
GO:0006562 TAS proline catabolic process
GO:0008152 IEA metabolic process
GO:0009055 TAS electron carrier activity
GO:0010133 IEA proline catabolic process to glutamate
GO:0016491 IEA oxidoreductase activity
GO:0019470 TAS 4-hydroxyproline catabolic process
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0042802 IPI identical protein binding
GO:0044281 TAS small molecule metabolic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000039818 Aldh4a1-001 protein_coding Mus_musculus 0 1901
ENSMUST00000178644 Gm21969-001 nonsense_mediated_decay Mus_musculus 0 1291
ENSMUST00000146309 Aldh4a1-002 processed_transcript Mus_musculus 0 1059

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