Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	elongation factor Tu GTP binding domain containing 1
ENSMUST00000039881	Eftud1-001	ENSMUSG00000038563	10090	+	7:82648641-82777852	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000039881	1.991±0.72	0.888±0.04	2.117±0.36	2.096±0.45	1.186±0.20	1.840±0.30	0.644±0.13	1.757±0.39	1.587±0.63	1.819±0.86	1.408±0.69	2.703±1.84	2.696±1.30	4.526±0.34

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0007U9	CIL_0007U9_0002	VISTA	7:82082717-82683985

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0003746	IEA	translation elongation factor activity
GO:0003924	ISS	GTPase activity
GO:0005525	IEA	GTP binding
GO:0005575	ND	cellular_component
GO:0006184	ISS	GTP catabolic process
GO:0006414	IEA	translational elongation
GO:0042256	ISS	mature ribosome assembly
GO:0043022	ISS	ribosome binding

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENST00000268206	EFTUD1-002	protein_coding	Homo_sapiens	0	3869
ENST00000359445	EFTUD1-001	protein_coding	Homo_sapiens	0	3567
ENST00000557939	EFTUD1-006	protein_coding	Homo_sapiens	0	278
ENST00000558187	EFTUD1P1-001	processed_transcript	Homo_sapiens	0	496
ENST00000558550	EFTUD1P1-003	processed_transcript	Homo_sapiens	0	272
ENST00000560381	EFTUD1P1-004	processed_transcript	Homo_sapiens	0	407
ENST00000560401	EFTUD1P1-002	transcribed_unprocessed_pseudogene	Homo_sapiens	0	931
ENST00000561331	EFTUD1-007	processed_transcript	Homo_sapiens	0	604
ENST00000561340	EFTUD1-010	processed_transcript	Homo_sapiens	0	492
ENST00000561389	EFTUD1-003	nonsense_mediated_decay	Homo_sapiens	0	501

Loading