C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: elongation factor Tu GTP binding domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038563 Eftud1 10090 + 7:82648614-82777852 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000039881 Eftud1-001 82648641-82777852 protein_coding
  ENSMUST00000125245 Eftud1-002 82648629-82698684 retained_intron
  ENSMUST00000141726 Eftud1-003 82648614-82674555 protein_coding
  ENSMUST00000153265 Eftud1-004 82670229-82674544 processed_transcript
  ENSMUST00000179489 Eftud1-201 82648614-82777852 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039881ENSMUST00000125245ENSMUST00000141726ENSMUST00000153265ENSMUST00000179489
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039881 1.991±0.72 0.888±0.04 2.117±0.36 2.096±0.45 1.186±0.20 1.840±0.30 0.644±0.13 1.757±0.39 1.587±0.63 1.819±0.86 1.408±0.69 2.703±1.84 2.696±1.30 4.526±0.34
ENSMUST00000125245 N/A 0.462±0.13 N/A N/A 0.432±0.04 N/A N/A N/A N/A N/A N/A 1.105±0.00 N/A N/A
ENSMUST00000141726 3.415±0.00 N/A N/A N/A 2.875±1.19 1.987±0.04 0.872±0.11 N/A N/A N/A N/A 4.041±1.25 N/A N/A
ENSMUST00000153265 N/A 1.358±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.029±0.00 N/A
ENSMUST00000179489 1.269±0.55 0.691±0.09 1.110±0.37 1.229±0.53 1.058±0.48 0.991±0.78 0.545±0.23 0.923±0.27 0.672±0.21 0.796±0.24 1.378±0.55 1.928±0.94 1.191±0.54 10.620±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007U9 CIL_0007U9_0002 VISTA 7:82082717-82683985

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003746 IEA translation elongation factor activity
GO:0003924 ISS GTPase activity
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0006184 ISS GTP catabolic process
GO:0006414 IEA translational elongation
GO:0042256 ISS mature ribosome assembly
GO:0043022 ISS ribosome binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079672 EFTUD1 elongation factor Tu GTP binding domain containing 1 protein_coding Danio_rerio
ENSG00000140598 EFTUD1 elongation factor Tu GTP binding domain containing 1 protein_coding Homo_sapiens

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