C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carbohydrate sulfotransferase 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040110 Chst11-001 ENSMUSG00000034612 10090 + 10:82985498-83195900 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040110
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040110 9.695±5.59 26.851±8.21 2.859±0.69 5.789±2.45 9.314±3.40 3.914±0.89 2.151±0.10 3.308±1.28 1.593±2.07 8.061±1.49 0.446±0.11 67.742±38.15 5.612±2.80 0.220±0.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TA CIL_0002TA_0002 CGP 10:82985498-83337882

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001537 IEA N-acetylgalactosamine 4-O-sulfotransferase activity
GO:0002063 IMP chondrocyte development
GO:0005794 IEA Golgi apparatus
GO:0007585 IMP respiratory gaseous exchange
GO:0008146 IDA sulfotransferase activity
GO:0009791 IMP post-embryonic development
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016051 IEA carbohydrate biosynthetic process
GO:0030204 IMP chondroitin sulfate metabolic process
GO:0030206 IDA chondroitin sulfate biosynthetic process
GO:0030326 IMP embryonic limb morphogenesis
GO:0030512 IMP negative regulation of transforming growth factor beta receptor signaling pathway
GO:0033037 IMP polysaccharide localization
GO:0036342 IMP post-anal tail morphogenesis
GO:0042127 IMP regulation of cell proliferation
GO:0042733 IMP embryonic digit morphogenesis
GO:0043066 IMP negative regulation of apoptotic process
GO:0047756 IEA chondroitin 4-sulfotransferase activity
GO:0048589 IMP developmental growth
GO:0048703 IMP embryonic viscerocranium morphogenesis
GO:0048704 IMP embryonic skeletal system morphogenesis
GO:0050659 IDA N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity
GO:0051216 IMP cartilage development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000042963 chst11-001 protein_coding Danio_rerio 0 553
ENST00000303694 CHST11-001 protein_coding Homo_sapiens 0 1836
ENST00000546689 CHST11-006 protein_coding Homo_sapiens 0 379
ENST00000547956 CHST11-007 protein_coding Homo_sapiens 0 475
ENST00000549016 CHST11-005 protein_coding Homo_sapiens 0 634
ENST00000549260 CHST11-002 protein_coding Homo_sapiens 0 1738

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