C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily C, member 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040184 Trpc5-001 ENSMUSG00000041710 10090 - X:144381671-144688180 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainHeartKidneyLiverOvaryPlacentaTestisENSMUST00000040184
Transcript ID Adipose Adrenal Bladder Brain Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000040184 0.018±0.01 0.147±0.06 0.003±0.00 1.488±0.00 0.006±0.00 0.053±0.03 0.025±0.01 0.124±0.04 0.015±0.01 0.030±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007A4 CIL_0007A4_0002 CGP X:144381671-145122411

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005262 IEA calcium channel activity
GO:0005515 IPI protein binding
GO:0005886 IEA plasma membrane
GO:0034704 IEA calcium channel complex
GO:0070588 IEA calcium ion transmembrane transport
GO:0070679 IDA inositol 1,4,5 trisphosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000131294 trpc5a-002 protein_coding Danio_rerio 0 1188
ENSDART00000040502 trpc5a-201 protein_coding Danio_rerio 0 649
ENST00000262839 TRPC5-001 protein_coding Homo_sapiens 0 4041

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