C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proteasome (prosome, macropain) subunit, alpha type, 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040860 Psma8-201 ENSMUSG00000036743 10090 + 18:14706151-14762299 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040860
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040860 0.144±0.02 0.279±0.14 0.072±0.02 0.086±0.03 0.080±0.04 0.106±0.04 0.125±0.10 0.084±0.08 0.511±0.15 0.194±0.06 0.023±0.00 0.665±0.37 0.098±0.05 28.959±7.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007LU CIL_0007LU_0002 UCNEbase 18:13186157-15176263
CIL_0008CS CIL_0008CS_0002 VISTA 18:14158160-14760150
CIL_0006ET CIL_0006ET_0002 CGP 18:14624198-14762299
CIL_0000QZ CIL_0000QZ_0002 CGP 18:14706151-14900359

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004298 IEA threonine-type endopeptidase activity
GO:0005634 IEA nucleus
GO:0005829 TAS cytosol
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0019773 IEA proteasome core complex, alpha-subunit complex
GO:0070062 IEA extracellular vesicular exosome
GO:1990111 IDA spermatoproteasome complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308268 PSMA8-001 protein_coding Homo_sapiens 0 845
ENST00000343848 PSMA8-003 protein_coding Homo_sapiens 0 616
ENST00000415576 PSMA8-002 protein_coding Homo_sapiens 0 917
ENST00000538664 PSMA8-004 nonsense_mediated_decay Homo_sapiens 0 780
ENST00000612461 PSMA8-201 protein_coding Homo_sapiens 0 780

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