C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0008CS_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| hs1566 | VISTA | 9606 | 18:25552759-26154861  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000141380  (SS18)synovial sarcoma translocation, chromosome 18 |
ENST00000269137 (SS18-001)
|
26018014-26090901 | protein_coding | |
|
ENST00000269138 (SS18-007)
|
26018007-26090598 | nonsense_mediated_decay | ||
|
ENST00000415083 (SS18-003)
|
26016253-26090625 | protein_coding | ||
|
ENST00000539244 (SS18-006)
|
26035091-26090613 | nonsense_mediated_decay | ||
|
ENST00000542420 (SS18-002)
|
26017343-26091217 | protein_coding | ||
|
ENST00000577572 (SS18-011)
|
26057699-26090625 | nonsense_mediated_decay | ||
|
ENST00000577636 (SS18-026)
|
26052743-26091192 | nonsense_mediated_decay | ||
|
ENST00000577751 (SS18-008)
|
26064832-26090135 | processed_transcript | ||
|
ENST00000578595 (SS18-021)
|
26080371-26090100 | processed_transcript | ||
|
ENST00000578700 (SS18-010)
|
26052823-26091216 | nonsense_mediated_decay | ||
|
ENST00000578954 (SS18-014)
|
26052682-26090652 | nonsense_mediated_decay | ||
|
ENST00000579061 (SS18-024)
|
26052705-26091192 | protein_coding | ||
|
ENST00000579640 (SS18-004)
|
26017885-26090610 | nonsense_mediated_decay | ||
|
ENST00000580003 (SS18-012)
|
26068260-26078386 | retained_intron | ||
|
ENST00000580642 (SS18-019)
|
26078103-26090625 | nonsense_mediated_decay | ||
|
ENST00000580751 (SS18-018)
|
26078076-26090625 | nonsense_mediated_decay | ||
|
ENST00000580958 (SS18-013)
|
26018350-26035614 | retained_intron | ||
|
ENST00000581021 (SS18-022)
|
26057695-26090135 | protein_coding | ||
|
ENST00000581570 (SS18-016)
|
26057732-26090608 | nonsense_mediated_decay | ||
|
ENST00000582092 (SS18-027)
|
26023613-26035065 | processed_transcript | ||
|
ENST00000582448 (SS18-009)
|
26057719-26091192 | nonsense_mediated_decay | ||
|
ENST00000582792 (SS18-017)
|
26057612-26090597 | nonsense_mediated_decay | ||
|
ENST00000583595 (SS18-015)
|
26082383-26086027 | processed_transcript | ||
|
ENST00000584083 (SS18-023)
|
26052771-26090096 | protein_coding | ||
|
ENST00000585121 (SS18-005)
|
26018120-26090597 | nonsense_mediated_decay | ||
|
ENST00000585241 (SS18-025)
|
26039410-26090625 | processed_transcript | ||
|
ENSG00000154611 (PSMA8) proteasome (prosome, macropain) subunit, alpha type, 8 |
ENST00000308268 (PSMA8-001)
|
26133877-26193355 | protein_coding | |
|
ENST00000343848 (PSMA8-003)
|
26133874-26193355 | protein_coding | ||
|
ENST00000415576 (PSMA8-002)
|
26133852-26192824 | protein_coding | ||
|
ENST00000538664 (PSMA8-004)
|
26133852-26193355 | nonsense_mediated_decay | ||
|
ENST00000612461 (PSMA8-201)
|
26140086-26193355 | protein_coding | ||
|
ENSG00000243925 (RPS24P18) ribosomal protein S24 pseudogene 18 |
ENST00000468051 (RPS24P18-001)
|
26098839-26099226 | processed_pseudogene | |
| CIL_0008CS_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| hs1566 | VISTA | 10090 | 18:14158160-14760150 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000036743 (Psma8) proteasome (prosome, macropain) subunit, alpha type, 8 |
ENSMUST00000040860 (Psma8-201)
|
14706151-14762299 | protein_coding | |
|
ENSMUSG00000037013 (Ss18) synovial sarcoma translocation, Chromosome 18 |
ENSMUST00000040924 (Ss18-201)
|
14625631-14682914 | protein_coding | |
|
ENSMUST00000040964 (Ss18-202)
|
14624198-14682766 | protein_coding | ||
|
ENSMUST00000092041 (Ss18-203)
|
14625631-14682914 | protein_coding | ||
|
ENSMUSG00000053740 (Gm6457) predicted pseudogene 6457 |
ENSMUST00000066378 (Gm6457-201)
|
14570101-14570915 | processed_pseudogene | |
|
ENSMUSG00000055795 (Gm5160) predicted gene 5160 |
ENSMUST00000069552 (Gm5160-201)
|
14424868-14425311 | protein_coding | |
|
ENSMUSG00000094306 (Gm24924) predicted gene, 24924 |
ENSMUST00000084007 (Gm24924-201)
|
14647767-14647930 | snRNA | |
Expression Patterns
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