C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: vacuolar protein sorting 37B (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040967 Vps37b-201 ENSMUSG00000066278 10090 - 5:124004641-124032260 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040967
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040967 5.913±2.06 72.906±5.23 20.682±2.76 27.258±12.90 16.454±1.08 27.356±8.74 4.279±0.85 10.012±2.37 12.343±2.87 13.958±4.04 2.169±0.54 22.594±8.04 11.584±2.48 21.222±7.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084E CIL_00084E_0002 VISTA 5:123871507-124476501
CIL_0002PB CIL_0002PB_0002 CGP 5:123973628-124032260
CIL_00006P CIL_00006P_0003 CGP 5:124004641-124095798

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000813 ISS ESCRT I complex
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0015031 IEA protein transport
GO:0030496 IEA midbody
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000267202 VPS37B-001 protein_coding Homo_sapiens 0 874
ENST00000371248 VPS37B-004 protein_coding Homo_sapiens 0 497
ENST00000535765 VPS37B-003 protein_coding Homo_sapiens 0 760
ENST00000543590 VPS37B-002 retained_intron Homo_sapiens 0 209

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