C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041110 Ttc7-001 ENSMUSG00000036918 10090 + 17:87282886-87381769 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041110
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041110 4.836±1.83 2.671±0.72 4.555±0.75 1.100±0.53 9.425±2.45 18.540±1.67 1.358±0.22 14.616±1.74 6.692±2.23 12.513±0.56 1.158±0.10 3.391±0.98 4.334±0.89 9.954±4.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D2 CIL_0008D2_0002 VISTA 17:87075116-87678515
CIL_0003T5 CIL_0003T5_0003 CGP 17:87254658-87381769
CIL_0003T6 CIL_0003T6_0003 CGP 17:87282886-87427741

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006879 IMP cellular iron ion homeostasis
GO:0030097 IMP hemopoiesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319190 TTC7A-001 protein_coding Homo_sapiens 0 3145
ENST00000394850 TTC7A-002 protein_coding Homo_sapiens 0 2324
ENST00000409245 TTC7A-005 protein_coding Homo_sapiens 0 2693
ENST00000409825 TTC7A-006 nonsense_mediated_decay Homo_sapiens 0 2340
ENST00000440051 TTC7A-010 nonsense_mediated_decay Homo_sapiens 0 375
ENST00000441914 TTC7A-004 nonsense_mediated_decay Homo_sapiens 0 1760
ENST00000461601 TTC7A-003 processed_transcript Homo_sapiens 0 1413
ENST00000474321 TTC7A-009 processed_transcript Homo_sapiens 0 568
ENST00000484061 TTC7A-008 retained_intron Homo_sapiens 0 1147
ENST00000484337 TTC7A-011 processed_transcript Homo_sapiens 0 608
ENST00000491786 TTC7A-007 retained_intron Homo_sapiens 0 2187
ENST00000496991 TTC7A-012 processed_transcript Homo_sapiens 0 274

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