C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 7A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000319190 TTC7A-001 ENSG00000068724 9606 + 2:46941174-47076135 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalKidneyLungOvaryPlacentaTestisENST00000319190
Transcript ID Adrenal Kidney Lung Ovary Placenta Testis
ENST00000319190 8.658±0.00 8.315±0.00 11.974±0.00 9.545±0.00 8.417±1.80 13.309±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KK CIL_0006KK_0001 CGP 2:46698952-46941855
CIL_0008D2 CIL_0008D2_0001 VISTA 2:46768636-47372293
CIL_0003T5 CIL_0003T5_0002 CGP 2:46901870-47076137
CIL_0003T6 CIL_0003T6_0002 CGP 2:46916157-47155378

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041110 Ttc7-001 protein_coding Mus_musculus 0 3145
ENSMUST00000125875 Ttc7-002 protein_coding Mus_musculus 0 2830
ENSMUST00000154255 Ttc7-009 nonsense_mediated_decay Mus_musculus 0 2327
ENSMUST00000144204 Ttc7-008 nonsense_mediated_decay Mus_musculus 0 1413
ENSMUST00000126497 Ttc7-003 processed_transcript Mus_musculus 0 449
ENSMUST00000153014 Ttc7-005 retained_intron Mus_musculus 0 353

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