C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif-containing 37
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041282 Trim37-001 ENSMUSG00000018548 10090 + 11:87127077-87220683 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041282
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041282 1.749±0.83 0.757±0.44 3.064±0.08 29.944±15.23 1.144±0.52 1.211±0.47 0.905±0.07 1.407±0.28 3.055±2.62 1.342±0.85 0.798±0.14 3.591±2.96 1.592±0.60 27.570±16.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003682 IDA chromatin binding
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005164 IEA tumor necrosis factor receptor binding
GO:0005737 ISS cytoplasm
GO:0005777 IEA peroxisome
GO:0005829 IEA cytosol
GO:0008270 IEA zinc ion binding
GO:0016235 IEA aggresome
GO:0016874 IEA ligase activity
GO:0031625 IEA ubiquitin protein ligase binding
GO:0032088 IEA negative regulation of NF-kappaB transcription factor activity
GO:0042803 IEA protein homodimerization activity
GO:0046600 ISS negative regulation of centriole replication
GO:0051091 IEA positive regulation of sequence-specific DNA binding transcription factor activity
GO:0051092 IEA positive regulation of NF-kappaB transcription factor activity
GO:0051865 IEA protein autoubiquitination
GO:0070842 IEA aggresome assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262294 TRIM37-002 protein_coding Homo_sapiens 0 3775
ENST00000393065 TRIM37-003 protein_coding Homo_sapiens 0 3491
ENST00000393066 TRIM37-001 protein_coding Homo_sapiens 0 3670
ENST00000577554 TRIM37-004 nonsense_mediated_decay Homo_sapiens 0 3072
ENST00000580122 TRIM37-010 nonsense_mediated_decay Homo_sapiens 0 383
ENST00000580620 TRIM37-006 retained_intron Homo_sapiens 0 331
ENST00000580973 TRIM37-007 nonsense_mediated_decay Homo_sapiens 0 335
ENST00000581468 TRIM37-008 protein_coding Homo_sapiens 0 392
ENST00000583387 TRIM37-005 retained_intron Homo_sapiens 0 472
ENST00000583945 TRIM37-011 protein_coding Homo_sapiens 1e-18 97
ENST00000584889 TRIM37-013 protein_coding Homo_sapiens 0 399
ENST00000585287 TRIM37-012 protein_coding Homo_sapiens 0 189

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