C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 37
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262294 TRIM37-002 ENSG00000108395 9606 - 17:58998202-59106721 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262294
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262294 2.066±0.00 3.498±0.00 27.331±4.79 3.647±0.00 3.403±1.04 2.908±1.67 3.330±0.85 1.672±0.00 2.479±0.00 2.020±1.03 5.523±1.08 4.403±2.57 32.572±13.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000566 CIL_000566_0002 CGP 17:58692573-58985176
CIL_000565 CIL_000565_0002 CGP 17:58755869-59106921

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003682 IEA chromatin binding
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005164 IPI tumor necrosis factor receptor binding
GO:0005515 IPI:IEA protein binding
GO:0005622 IEA intracellular
GO:0005737 IDA cytoplasm
GO:0005777 IDA peroxisome
GO:0005829 IDA cytosol
GO:0008270 IEA zinc ion binding
GO:0016235 IDA aggresome
GO:0016874 IEA ligase activity
GO:0031625 IPI ubiquitin protein ligase binding
GO:0032088 IDA negative regulation of NF-kappaB transcription factor activity
GO:0042803 IDA protein homodimerization activity
GO:0046600 IMP negative regulation of centriole replication
GO:0051091 IDA positive regulation of sequence-specific DNA binding transcription factor activity
GO:0051092 IDA positive regulation of NF-kappaB transcription factor activity
GO:0051865 IDA protein autoubiquitination
GO:0070842 IDA aggresome assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041282 Trim37-001 protein_coding Mus_musculus 0 3775
ENSMUST00000152637 Trim37-004 retained_intron Mus_musculus 0 970
ENSMUST00000139532 Trim37-002 protein_coding Mus_musculus 0 684
ENSMUST00000154138 Trim37-003 protein_coding Mus_musculus 0 662

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