C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 37
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000577554 TRIM37-004 ENSG00000108395 9606 - 17:58998200-59106740 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalLiverLungOvaryENST00000577554
Transcript ID Adipose Adrenal Liver Lung Ovary
ENST00000577554 0.611±0.00 0.792±0.00 0.553±0.00 1.312±0.00 0.954±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000566 CIL_000566_0002 CGP 17:58692573-58985176
CIL_000565 CIL_000565_0002 CGP 17:58755869-59106921

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041282 Trim37-001 protein_coding Mus_musculus 0 3072
ENSMUST00000152637 Trim37-004 retained_intron Mus_musculus 0 970
ENSMUST00000139532 Trim37-002 protein_coding Mus_musculus 0 684
ENSMUST00000154138 Trim37-003 protein_coding Mus_musculus 0 662

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