C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 37
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000393065 TRIM37-003 ENSG00000108395 9606 - 17:58998987-59106826 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastHeartLiverLungMuscleOvaryENST00000393065
Transcript ID Adipose Bladder Breast Heart Liver Lung Muscle Ovary
ENST00000393065 1.069±0.00 0.782±0.00 1.900±0.00 0.898±0.00 2.985±0.00 1.532±0.00 0.292±0.00 3.410±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000566 CIL_000566_0002 CGP 17:58692573-58985176
CIL_000565 CIL_000565_0002 CGP 17:58755869-59106921

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000041282 Trim37-001 protein_coding Mus_musculus 0 3491
ENSMUST00000152637 Trim37-004 retained_intron Mus_musculus 0 970
ENSMUST00000139532 Trim37-002 protein_coding Mus_musculus 0 684
ENSMUST00000154138 Trim37-003 protein_coding Mus_musculus 0 662

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