C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBC1 domain family, member 2B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000041767 Tbc1d2b-001 ENSMUSG00000037410 10090 - 9:90202027-90270769 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041767
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041767 17.957±5.18 14.190±2.45 17.259±3.40 3.437±2.13 19.672±7.01 11.489±1.22 3.330±0.98 7.370±2.27 6.385±1.45 25.490±4.62 0.909±0.36 19.857±4.21 2.691±0.99 0.844±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085Y CIL_00085Y_0002 VISTA 9:90013787-90616367
CIL_0008X0 CIL_0008X0_0002 VISTA 9:90119621-90721316

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005097 IEA Rab GTPase activator activity
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300584 TBC1D2B-003 protein_coding Homo_sapiens 0 3223
ENST00000409931 TBC1D2B-001 protein_coding Homo_sapiens 0 2977
ENST00000435468 TBC1D2B-004 protein_coding Homo_sapiens 0 782
ENST00000472786 TBC1D2B-009 retained_intron Homo_sapiens 0 1293
ENST00000486703 TBC1D2B-002 retained_intron Homo_sapiens 0 305
ENST00000497942 TBC1D2B-011 retained_intron Homo_sapiens 0 311

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