C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008X0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1115 VISTA 9606 3:147988712-148590023
GeneTranscriptPositionBiotype
ENSG00000205412 (HNRNPA1P20)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 20 		ENST00000484852 (HNRNPA1P20-001) 148166344-148167298 processed_pseudogene
ENSG00000239922 (RP11-71N10.1)
 ENST00000467198 (RP11-71N10.1-001) 147940004-147943014 lincRNA
ENST00000485006 (RP11-71N10.1-002) 147940020-148006755 lincRNA
ENSG00000241131 (RP11-639B1.1)
 ENST00000490465 (RP11-639B1.1-001) 148078159-148088029 lincRNA
ENSG00000241792 (RP11-501O2.1)
 ENST00000476987 (RP11-501O2.1-001) 148093175-148127233 lincRNA
ENSG00000242440 (RP11-501O2.5)
 ENST00000469812 (RP11-501O2.5-001) 148280891-148312160 lincRNA
ENST00000481334 (RP11-501O2.5-002) 148312147-148399956 lincRNA
ENSG00000243347 (RP11-501O2.4)
 ENST00000460324 (RP11-501O2.4-001) 148195729-148280098 lincRNA
ENSG00000244650 (RP11-501O2.3)
 ENST00000470219 (RP11-501O2.3-001) 148191719-148226606 lincRNA
ENST00000477153 (RP11-501O2.3-002) 148160911-148226595 lincRNA
CIL_0008X0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1115 VISTA 10090 9:90119621-90721316
GeneTranscriptPositionBiotype
ENSMUSG00000032363 (Adamts7)
a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7 		ENSMUST00000113059 (Adamts7-001) 90163069-90200100 protein_coding
ENSMUST00000113060 (Adamts7-003) 90163226-90200102 protein_coding
ENSMUST00000124441 (Adamts7-004) 90195128-90200097 retained_intron
ENSMUST00000134996 (Adamts7-002) 90163124-90200100 nonsense_mediated_decay
ENSMUST00000138227 (Adamts7-006) 90190984-90193487 processed_transcript
ENSMUST00000144943 (Adamts7-005) 90188654-90191565 retained_intron
ENSMUST00000147250 (Adamts7-010) 90163202-90199990 protein_coding
ENSMUST00000167122 (Adamts7-008) 90163078-90208071 protein_coding
ENSMUSG00000037410 (Tbc1d2b)
TBC1 domain family, member 2B 		ENSMUST00000041767 (Tbc1d2b-001) 90202027-90270769 protein_coding
ENSMUST00000128874 (Tbc1d2b-002) 90238280-90270771 protein_coding
ENSMUST00000144348 (Tbc1d2b-003) 90229053-90270804 nonsense_mediated_decay
ENSMUST00000144646 (Tbc1d2b-004) 90241163-90255927 processed_transcript
ENSMUSG00000081520 (Gm16200)
predicted gene 16200 		ENSMUST00000120385 (Gm16200-001) 90221295-90221625 processed_pseudogene
ENSMUSG00000096647 (Gm6223)
predicted gene 6223 		ENSMUST00000178436 (Gm6223-001) 90118937-90119807 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008X0_0001ENSG00000205412ENST00000484852ENSG00000239922ENST00000467198ENST00000485006ENSG00000241131ENST00000490465ENSG00000241792ENST00000476987ENSG00000242440ENST00000469812ENST00000481334ENSG00000243347ENST00000460324ENSG00000244650ENST00000470219ENST00000477153CIL_0008X0_0002ENSMUSG00000032363ENSMUST00000113059ENSMUST00000113060ENSMUST00000124441ENSMUST00000134996ENSMUST00000138227ENSMUST00000144943ENSMUST00000147250ENSMUST00000167122ENSMUSG00000037410ENSMUST00000041767ENSMUST00000128874ENSMUST00000144348ENSMUST00000144646ENSMUSG00000081520ENSMUST00000120385ENSMUSG00000096647ENSMUST00000178436
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008X0_0001ENSG00000205412ENST00000484852ENSG00000239922ENST00000467198ENST00000485006ENSG00000241131ENST00000490465ENSG00000241792ENST00000476987ENSG00000242440ENST00000469812ENST00000481334ENSG00000243347ENST00000460324ENSG00000244650ENST00000470219ENST00000477153CIL_0008X0_0002ENSMUSG00000032363ENSMUST00000113059ENSMUST00000113060ENSMUST00000134996ENSMUST00000147250ENSMUSG00000037410ENSMUST00000041767ENSMUST00000144348ENSMUSG00000081520ENSMUST00000120385ENSMUSG00000096647ENSMUST00000178436
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000205412 ENST00000484852 0.039±0.00 0.097±0.00 N/A 0.028±0.00 0.014±0.00 0.013±0.00 N/A N/A N/A N/A 0.049±0.00 0.017±0.00 N/A 0.122±0.03
ENSG00000239922 ENST00000467198 0.003±0.00 0.036±0.00 N/A 0.264±0.00 0.039±0.00 0.014±0.00 0.009±0.00 0.006±0.00 0.003±0.00 0.023±0.00 N/A N/A N/A 0.009±0.00
ENST00000485006 N/A N/A N/A 1.279±0.00 N/A N/A 0.033±0.00 N/A N/A N/A N/A N/A N/A 0.210±0.18
ENSG00000241131 ENST00000490465 N/A N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A N/A N/A N/A N/A 6.451±3.50
ENSG00000241792 ENST00000476987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.206±0.02
ENSG00000242440 ENST00000469812 0.053±0.00 N/A N/A N/A N/A N/A 0.049±0.00 N/A 0.047±0.00 0.151±0.00 0.047±0.00 N/A 0.146±0.00 1.107±0.00
ENST00000481334 0.122±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.203±0.00 0.357±0.00
ENSG00000243347 ENST00000460324 N/A N/A N/A 0.055±0.00 N/A 0.018±0.00 N/A N/A 0.017±0.00 N/A N/A N/A N/A 0.492±0.27
ENSG00000244650 ENST00000470219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.101±0.00
ENST00000477153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.100±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032363 ENSMUST00000113059 6.721±4.10 2.229±0.12 N/A 3.877±0.80 3.289±0.04 2.154±0.18 4.720±1.05 1.904±0.21 1.615±0.68 N/A N/A 5.303±0.74 0.803±0.00 0.421±0.09
ENSMUST00000113060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.357±0.17
ENSMUST00000124441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134996 N/A N/A N/A N/A N/A N/A 2.354±0.25 N/A N/A N/A 0.250±0.00 N/A N/A N/A
ENSMUST00000138227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144943 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147250 5.922±0.35 2.400±0.00 N/A 2.638±0.63 N/A N/A N/A N/A 1.978±0.42 N/A N/A 3.995±0.00 0.831±0.20 0.780±0.21
ENSMUST00000167122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037410 ENSMUST00000041767 17.957±5.18 14.190±2.45 17.259±3.40 3.437±2.13 19.672±7.01 11.489±1.22 3.330±0.98 7.370±2.27 6.385±1.45 25.490±4.62 0.909±0.36 19.857±4.21 2.691±0.99 0.844±0.22
ENSMUST00000128874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144348 N/A 22.237±0.45 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081520 ENSMUST00000120385 0.263±0.00 N/A 0.265±0.21 0.054±0.00 0.352±0.00 N/A N/A 0.339±0.12 0.242±0.11 0.379±0.00 N/A 0.330±0.15 0.125±0.07 N/A
ENSMUSG00000096647 ENSMUST00000178436 0.145±0.07 0.944±0.58 0.054±0.02 0.191±0.08 0.589±0.50 0.395±0.23 0.279±0.03 0.249±0.13 0.491±0.47 0.166±0.04 0.057±0.01 0.697±0.44 0.040±0.02 0.567±0.23

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