C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 43, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000042561 Slc43a2-001 ENSMUSG00000038178 10090 + 11:75531698-75577575 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042561
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042561 3.485±0.90 3.207±0.64 2.100±0.34 2.505±0.77 4.405±1.66 1.818±0.85 0.979±0.22 20.171±1.09 0.659±0.23 8.134±1.79 0.619±0.26 3.360±1.14 2.621±1.52 1.889±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006H7 CIL_0006H7_0002 CGP 11:75531694-75628804

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IDA plasma membrane
GO:0015179 IDA L-amino acid transmembrane transporter activity
GO:0015807 IDA L-amino acid transport
GO:0016021 IEA integral component of membrane
GO:1902475 IEA L-alpha-amino acid transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000301335 SLC43A2-001 protein_coding Homo_sapiens 0 2098
ENST00000382147 SLC43A2-201 protein_coding Homo_sapiens 0 1417
ENST00000412517 SLC43A2-005 protein_coding Homo_sapiens 0 1417
ENST00000571376 SLC43A2-012 nonsense_mediated_decay Homo_sapiens 0 300
ENST00000571650 SLC43A2-004 protein_coding Homo_sapiens 0 1997
ENST00000572135 SLC43A2-003 retained_intron Homo_sapiens 0 1498
ENST00000572801 SLC43A2-011 nonsense_mediated_decay Homo_sapiens 0 802
ENST00000574274 SLC43A2-007 processed_transcript Homo_sapiens 0 586
ENST00000574743 SLC43A2-002 retained_intron Homo_sapiens 0 1550
ENST00000576721 SLC43A2-008 nonsense_mediated_decay Homo_sapiens 0 322
ENST00000576769 SLC43A2-009 retained_intron Homo_sapiens 0 235
ENST00000612931 SLC43A2-202 protein_coding Homo_sapiens 0 2098
ENST00000613070 SLC43A2-203 protein_coding Homo_sapiens 0 2049
ENST00000616586 SLC43A2-204 protein_coding Homo_sapiens 0 1498

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