C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 43 (amino acid system L transporter), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000301335 SLC43A2-001 ENSG00000167703 9606 - 17:1569267-1628836 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000301335
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000301335 1.702±0.00 0.722±0.00 1.308±0.00 0.628±0.35 0.702±0.00 0.071±0.00 7.294±0.00 0.301±0.00 0.651±0.37 5.694±0.00 0.167±0.00 7.419±1.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060R CIL_00060R_0002 CGP 17:1517718-1628886

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0006811 TAS ion transport
GO:0006865 TAS amino acid transport
GO:0016021 IEA integral component of membrane
GO:0055085 TAS:IEA transmembrane transport
GO:1902475 IEA L-alpha-amino acid transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042561 Slc43a2-001 protein_coding Mus_musculus 0 2098
ENSMUST00000169547 Slc43a2-201 protein_coding Mus_musculus 0 2047
ENSMUST00000108433 Slc43a2-002 protein_coding Mus_musculus 0 2047
ENSMUST00000151891 Slc43a2-003 retained_intron Mus_musculus 0 826
ENSDART00000142298 slc43a2a-001 protein_coding Danio_rerio 0 719
ENSMUST00000134112 Slc43a2-005 retained_intron Mus_musculus 0 640
ENSMUST00000127226 Slc43a2-007 protein_coding Mus_musculus 0 630
ENSMUST00000143035 Slc43a2-008 protein_coding Mus_musculus 0 571
ENSMUST00000149727 Slc43a2-009 protein_coding Mus_musculus 0 431
ENSMUST00000155981 Slc43a2-006 processed_transcript Mus_musculus 0 420
ENSMUST00000145901 Slc43a2-004 processed_transcript Mus_musculus 0 281

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